Gene
| Gene Model ID | pfu_aug2.0_30.1_00079 |
|---|---|
| Locus | scaffold30.1 : 11706 ... 21263 : + |
| To GenomeBrowser | scaffold30.1:11706..21263 |
| Genes list of scaffold | scaffold30.1 |
| Synonym | pfu_aug1.0_328.1_36498 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_30.1_00079.t1 | 1 | 1 | NAC | 36 | 92 | 1.3e-23 | 82.2 | 1.5e-27 | 2.2e-23 | 81.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_30.1_00079.t1 | gi|524901283|ref|XP_005107052.1| | PREDICTED: transcription factor BTF3 homolog 4-like isoform X4 [Aplysia californica] | 0.0 |
| pfu_aug2.0_30.1_00079.t1 | gi|524901279|ref|XP_005107050.1| | PREDICTED: transcription factor BTF3 homolog 4-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_30.1_00079.t1 | gi|152012761|gb|AAI50463.1| | Btf3l4 protein [Danio rerio] | 0.0 |
| pfu_aug2.0_30.1_00079.t1 | gi|617436405|ref|XP_007563588.1| | PREDICTED: transcription factor BTF3-like [Poecilia formosa] | 0.0 |
| pfu_aug2.0_30.1_00079.t1 | gi|260818117|ref|XP_002603931.1| | hypothetical protein BRAFLDRAFT_131258 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_30.1_00079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00079.t1 atgaatccagaaaaattaaagcagctacaagaacaagtcagaattggtggcaagggaaccgcaagaaggaagaagaaggt agtccatcgtacggccacaacagacgataaaaagttacaaagctcactcaaaaagttgtcggtcagcaatattcctggaa tagaggaggtaaatatgattaaagatgatggtactgtgatccacttcaataatccaaaagttcaggcatctttagcagcc aatacgtttgcaatcactggacaagcagaaaacaaacagatagcagaaatgctgcctggaatcctgaaccagcttggtgc tgaaagcttcagtagcttaaagaaactagcatccacagtagctgcatcaggtgacaacaaaccgcccacagatgatattg atgatgatgatgatggagtcccagaattggtagaaaattttgatgaaacatcaaaaggagaatag |
|
Protein
| Protein ID | pfu_aug2.0_30.1_00079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00079.t1 MNPEKLKQLQEQVRIGGKGTARRKKKVVHRTATTDDKKLQSSLKKLSVSNIPGIEEVNMIKDDGTVIHFNNPKVQASLAA NTFAITGQAENKQIAEMLPGILNQLGAESFSSLKKLASTVAASGDNKPPTDDIDDDDDGVPELVENFDETSKGE |
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