Gene
| Gene Model ID | pfu_aug2.0_30.1_00080 |
|---|---|
| Locus | scaffold30.1 : 30676 ... 56238 : + |
| To GenomeBrowser | scaffold30.1:30676..56238 |
| Genes list of scaffold | scaffold30.1 |
| Synonym | pfu_aug1.0_328.1_36499 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_30.1_00080.t2 | 2 | 1 | TTL | 126 | 413 | 0.0 | 269.2 | 0.0 | 0.0 | 268.2 |
| pfu_aug2.0_30.1_00080.t2 | 4 | 1 | ATPgrasp_YheCD | 187 | 206 | 5.9e-06 | 25.2 | 0.004 | 8.4 | 5.0 |
| pfu_aug2.0_30.1_00080.t2 | 4 | 2 | ATPgrasp_YheCD | 213 | 243 | 5.9e-06 | 25.2 | 0.079 | 170.0 | 0.8 |
| pfu_aug2.0_30.1_00080.t2 | 4 | 3 | ATPgrasp_YheCD | 363 | 395 | 5.9e-06 | 25.2 | 1.4e-06 | 0.0031 | 16.3 |
| pfu_aug2.0_30.1_00080.t2 | 4 | 4 | ATPgrasp_YheCD | 438 | 473 | 5.9e-06 | 25.2 | 0.81 | 1700.0 | -2.5 |
| pfu_aug2.0_30.1_00080.t2 | 2 | 2 | TTL | 803 | 845 | 0.0 | 269.2 | 1.5 | 3300.0 | -3.3 |
Transcript
| Transcript ID | pfu_aug2.0_30.1_00080.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00080.t1 atgccgggagtaaaacagagcccctccctctcctccctatccctggagagacaacaagatgtgaccttgagctctctgac ccagtatgtccgtcgacctggtgctacccagcaaccaacattacagagcgcacggcgccccctggaggagaaaagggagg cagacaagggagacgaccgtcagatcgcccctgtcccaaagaaaaagaggaaaaagaaacacggagttactgccaattta aatggcacacgatatgatgtcattcgacaggtgtgtgagaaatgcaagtttgaaatctgtaaggatgatgatccaaacag ctacctcatatggaacgacagttttgtcgccattgaccgtatctccgatttgaagccttttcagaggataaatcatttcc ctggaatgggagaggtcacacgtaaagactgcctagctcgcaatatgatgaaagtccagaagcatcatcctgaggacttt tcatttgttcctaagacttggattttaccagcagaccatagccttctactcaattatgccaaagatctgaaatcaaaaaa gaaatataaaacttttattgtcaagccttccaatggagcacaggggcatggtattcagctatacagaaatgctgataaaa ttccccctacggagcatttcatcgtacaggaatatgtagacaaaccattcctcttggacggttacaagtttgaccttcgt atttatgtacttgtgacatcatgtgaccctttacgtgttttcatattcaatgacggtcttgtcagaatgagtacagagaa gtaccttccaccacatgaaaataatctgaatcatttatacatgcacttaacaaactactcagtgaacaagcataatgaat tctatgagaaaggtgaatctatggactctggtagcaagaggtcaatacgatattttaatgactacttgcgtcggaatgat tatgatgtagtgttgctatggcgacgtatccatgacatggtggtgaagactctaacagtagcacagccccatttactaca tcagtacaggatgtgtcgtccaggggctcctgccggcagtgatagtgtatgttttgaggtgctaggatttgatgttcttg ttgacaaaaagctgaatccttggttattggagatcaacagatctccaagtttcggaacagatgagaagatcgatcatgag atcaaatttgccatgatagacgacactattagactgctgaatatcaagctgagtgacaagaggaggaattatttcgcaca gaaggccgaggcgcagaaacgcttatttcgtacaacaaagcgtggggagggaggagatatgagtgattatgataaaaaac gacaaagcatagaaaagcggaaagaagaattgaaagaattgttggctcgggtaagaaaagctacagcgagagaagacttt gagaatcgtaacgctggccgctataagagaatcttcccctctgatgacaaggctaaacaacagaaatatatcagtctgat gtcttccatatttggtattttcatgtcaggtcgggcaccggcaatgcagaaagaaattcagaaagtctataacaaccaac taagggaagaagacattttggacatgatagctgagtgtgagactgacgagaaagatggtaaatacttcactagcggcggt aaccgtccattaaggggcccaaagccccttcagagtatgcctgtaagtcaacctagtcctcctgcagaagatgacgatga tgatgaagacgatgatgaagaggagacagaaagtgcctcaccctcaacttcgcccgatccaaaccggcgaggtatacctc tctcagccacaaatcgccgtcctccctccagtagagcagacagtcgtatgagtaatgatgcgtccagcttgtataactct cgaccaaactccggagtgtcgagtattaggtcaaggccagtcagtaatatgtcagttgtcaactctaggtcaaagtcgtt gtcaaggttacagggaaagcagtcagtacacagatctaccattgatgataattttctgctgaacgttgtgaaggagagag aggatgaactcactcataaaactttgatggcactgaatgacatgaggataaaatttcccggaaaatcggaccaagaagct gaactcattcttgatacactgcatgaaaactggaagtttcacaaaccaagaatagcgtcttactggcttgtaaaactgga ctcaattaaacgtagaaaggtaattgacattgtgcgatctaatgtgcgagcagttttacagcggacttggagagtcagtg atgtggataacctccgattatatcgtattttctcccgagtatttaacagattattatggagtcatggacagggactgtgg aactgtttttccacttcaagtaattctggcagctgggagacaatatttagtaagagttcagagaatattagtgagacaga gtttaactgctgtcggaggattgtacagctatgcagggattgtttgttgatcgtgtatcagtttgctgccgaggctaagt ccagtagtcaacagaacagcggaacagaaactgaccacagctcggcagggacgatgtcatccagagacaagtcaagttta ttaccgcctaacacccaaacactaagtcaacgctattcaaagctctacactaacgctaaaacggaaagtttcgggtcatg a |
|
| Transcript ID | pfu_aug2.0_30.1_00080.t2 |
| Definition | - |
>pfu_aug2.0_30.1_00080.t2 atgccgggagtaaaacagagcccctccctctcctccctatccctggagagacaacaagatgtgaccttgagctctctgac ccagtatgtccgtcgacctggtgctacccagcaaccaacattacagagcgcacggcgccccctggaggagaaaagggagg cagacaagggagacgaccgtcagatcgcccctgtcccaaagaaaaagaggaaaaagaaacacggagttactgccaattta aatggcacacgatatgatgtcattcgacaggtgtgtgagaaatgcaagtttgaaatctgtaaggatgatgatccaaacag ctacctcatatggaacgacagttttgtcgccattgaccgtatctccgatttgaagccttttcagaggataaatcatttcc ctggaatgggagaggtcacacgtaaagactgcctagctcgcaatatgatgaaagtccagaagcatcatcctgaggacttt tcatttgttcctaagacttggattttaccagcagaccatagccttctactcaattatgccaaagatctgaaatcaaaaaa gaaatataaaacttttattgtcaagccttccaatggagcacaggggcatggtattcagctatacagaaatgctgataaaa ttccccctacggagcatttcatcgtacaggaatatgtagacaaaccattcctcttggacggttacaagtttgaccttcgt atttatgtacttgtgacatcatgtgaccctttacgtgttttcatattcaatgacggtcttgtcagaatgagtacagagaa gtaccttccaccacatgaaaataatctgaatcatttatacatgcacttaacaaactactcagtgaacaagcataatgaat tctatgagaaaggtgaatctatggactctggtagcaagaggtcaatacgatattttaatgactacttgcgtcggaatgat tatgatgtagtgttgctatggcgacgtatccatgacatggtggtgaagactctaacagtagcacagccccatttactaca tcagtacaggatgtgtcgtccaggggctcctgccggcagtgatagtgtatgttttgaggtgctaggatttgatgttcttg ttgacaaaaagctgaatccttggttattggagatcaacagatctccaagtttcggaacagatgagaagatcgatcatgag atcaaatttgccatgatagacgacactattagactgctgaatatcaagctgagtgacaagaggaggaattatttcgcaca gaaggccgaggcgcagaaacgcttatttcgtacaacaaagcgtggggagggaggagatatgagtgattatgataaaaaac gacaaagcatagaaaagcggaaagaagaattgaaagaattgttggctcgggtaagaaaagctacagcgagagaagacttt gagaatcgtaacgctggccgctataagagaatcttcccctctgatgacaaggctaaacaacagaaatatatcagtctgat gtcttccatatttggtattttcatgtcaggtcgggcaccggcaatgcagaaagaaattcagaaagtctataacaaccaac taagggaagaagacattttggacatgatagctgagtgtgagactgacgagaaagatggtaaatacttcactagcggcggt aaccgtccattaaggggcccaaaggttggagcaaagccccttcagagtatgcctgtaagtcaacctagtcctcctgcaga agatgacgatgatgatgaagacgatgatgaagaggagacagaaagtgcctcaccctcaacttcgcccgatccaaaccggc gaggtatacctctctcagccacaaatcgccgtcctccctccagtagagcagacagtcgtatgagtaatgatgcgtccagc ttgtataactctcgaccaaactccggagtgtcgagtattaggtcaaggccagtcagtaatatgtcagttgtcaactctag gtcaaagtcgttgtcaaggttacagggaaagcagtcagtacacagatctaccattgatgataattttctgctgaacgttg tgaaggagagagaggatgaactcactcataaaactttgatggcactgaatgacatgaggataaaatttcccggaaaatcg gaccaagaagctgaactcattcttgatacactgcatgaaaactggaagtttcacaaaccaagaatagcgtcttactggct tgtaaaactggactcaattaaacgtagaaaggtaattgacattgtgcgatctaatgtgcgagcagttttacagcggactt ggagagtcagtgatgtggataacctccgattatatcgtattttctcccgagtatttaacagattattatggagtcatgga cagggactgtggaactgtttttccacttcaagtaattctggcagctgggagacaatatttagtaagagttcagagaatat tagtgagacagagtttaactgctgtcggaggattgtacagctatgcagggattgtttgttgatcgtgtatcagtttgctg ccgaggctaagtccagtagtcaacagaacagcggaacagaaactgaccacagctcggcagggacgatgtcatccagagac aagtcaagtttattaccgcctaacacccaaacactaagtcaacgctattcaaagctctacactaacgctaaaacggaaag tttcgggtcatga |
|
Protein
| Protein ID | pfu_aug2.0_30.1_00080.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00080.t1 MPGVKQSPSLSSLSLERQQDVTLSSLTQYVRRPGATQQPTLQSARRPLEEKREADKGDDRQIAPVPKKKRKKKHGVTANL NGTRYDVIRQVCEKCKFEICKDDDPNSYLIWNDSFVAIDRISDLKPFQRINHFPGMGEVTRKDCLARNMMKVQKHHPEDF SFVPKTWILPADHSLLLNYAKDLKSKKKYKTFIVKPSNGAQGHGIQLYRNADKIPPTEHFIVQEYVDKPFLLDGYKFDLR IYVLVTSCDPLRVFIFNDGLVRMSTEKYLPPHENNLNHLYMHLTNYSVNKHNEFYEKGESMDSGSKRSIRYFNDYLRRND YDVVLLWRRIHDMVVKTLTVAQPHLLHQYRMCRPGAPAGSDSVCFEVLGFDVLVDKKLNPWLLEINRSPSFGTDEKIDHE IKFAMIDDTIRLLNIKLSDKRRNYFAQKAEAQKRLFRTTKRGEGGDMSDYDKKRQSIEKRKEELKELLARVRKATAREDF ENRNAGRYKRIFPSDDKAKQQKYISLMSSIFGIFMSGRAPAMQKEIQKVYNNQLREEDILDMIAECETDEKDGKYFTSGG NRPLRGPKPLQSMPVSQPSPPAEDDDDDEDDDEEETESASPSTSPDPNRRGIPLSATNRRPPSSRADSRMSNDASSLYNS RPNSGVSSIRSRPVSNMSVVNSRSKSLSRLQGKQSVHRSTIDDNFLLNVVKEREDELTHKTLMALNDMRIKFPGKSDQEA ELILDTLHENWKFHKPRIASYWLVKLDSIKRRKVIDIVRSNVRAVLQRTWRVSDVDNLRLYRIFSRVFNRLLWSHGQGLW NCFSTSSNSGSWETIFSKSSENISETEFNCCRRIVQLCRDCLLIVYQFAAEAKSSSQQNSGTETDHSSAGTMSSRDKSSL LPPNTQTLSQRYSKLYTNAKTESFGS |
|
| Protein ID | pfu_aug2.0_30.1_00080.t2 |
| Definition | - |
>pfu_aug2.0_30.1_00080.t2 MPGVKQSPSLSSLSLERQQDVTLSSLTQYVRRPGATQQPTLQSARRPLEEKREADKGDDRQIAPVPKKKRKKKHGVTANL NGTRYDVIRQVCEKCKFEICKDDDPNSYLIWNDSFVAIDRISDLKPFQRINHFPGMGEVTRKDCLARNMMKVQKHHPEDF SFVPKTWILPADHSLLLNYAKDLKSKKKYKTFIVKPSNGAQGHGIQLYRNADKIPPTEHFIVQEYVDKPFLLDGYKFDLR IYVLVTSCDPLRVFIFNDGLVRMSTEKYLPPHENNLNHLYMHLTNYSVNKHNEFYEKGESMDSGSKRSIRYFNDYLRRND YDVVLLWRRIHDMVVKTLTVAQPHLLHQYRMCRPGAPAGSDSVCFEVLGFDVLVDKKLNPWLLEINRSPSFGTDEKIDHE IKFAMIDDTIRLLNIKLSDKRRNYFAQKAEAQKRLFRTTKRGEGGDMSDYDKKRQSIEKRKEELKELLARVRKATAREDF ENRNAGRYKRIFPSDDKAKQQKYISLMSSIFGIFMSGRAPAMQKEIQKVYNNQLREEDILDMIAECETDEKDGKYFTSGG NRPLRGPKVGAKPLQSMPVSQPSPPAEDDDDDEDDDEEETESASPSTSPDPNRRGIPLSATNRRPPSSRADSRMSNDASS LYNSRPNSGVSSIRSRPVSNMSVVNSRSKSLSRLQGKQSVHRSTIDDNFLLNVVKEREDELTHKTLMALNDMRIKFPGKS DQEAELILDTLHENWKFHKPRIASYWLVKLDSIKRRKVIDIVRSNVRAVLQRTWRVSDVDNLRLYRIFSRVFNRLLWSHG QGLWNCFSTSSNSGSWETIFSKSSENISETEFNCCRRIVQLCRDCLLIVYQFAAEAKSSSQQNSGTETDHSSAGTMSSRD KSSLLPPNTQTLSQRYSKLYTNAKTESFGS |
|