Gene
| Gene Model ID | pfu_aug2.0_30.1_00082 |
|---|---|
| Locus | scaffold30.1 : 72852 ... 90835 : - |
| To GenomeBrowser | scaffold30.1:72852..90835 |
| Genes list of scaffold | scaffold30.1 |
| Synonym | pfu_aug1.0_328.1_36501 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 40s ribosomal protein s12 | GO:0003735 GO:0005840 GO:0006412 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_30.1_00082.t2 | 1 | 1 | Ribosomal_L7Ae | 81 | 147 | 2.6e-20 | 71.7 | 2.6e-24 | 3.9e-20 | 71.1 |
Transcript
| Transcript ID | pfu_aug2.0_30.1_00082.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00082.t1 atgagtatatgtcgaccgacctgtggtcctggtgaggctcgaaccagcgatcttatggtcactggcccggcacccttacc actgcaccacggcgccgacagtaaaacttacagaggaaggagaagtcgaagagtaaaagtttacggacgacagacaaacg ttagaacgaaagacggactggcattcaaacgctgctcgaacgcaggtttgataatgttcactttgggtctgttgggctta agacgtcaagcccatttgtgtgtccttgcaaataactgtgacgagcccatgtatgtcaaactggtagaagctctctgtac ggaacatggaatcaacctgctcaaggttgacgacaataagaaactaggggaatgggcaggactatgcaaaatagacaaag aaggcaaagccaggaaaattgttggatgcagctgtgttgttgttaaggattatggcaaagagtcccaagccctggatgta ctcaacgactatttcaagaccaagaagtaa |
|
| Transcript ID | pfu_aug2.0_30.1_00082.t2 |
| Definition | - |
>pfu_aug2.0_30.1_00082.t2 atgagtatatgtcgaccgacctgtggtcctggtgaggctcgaaccagcgatcttatggtcactggcccggcacccttacc actgcaccacggcgccgacagtaaaacttacagaggaaggagaagtcgaagagtaaaagtttacggacgacagacaaacg ttagaacgaaagacggactggcattcaaacgctgctcgaacgcaggtttgataatgttcactttgggtctgttgggctta agacgtcaagcccatttgtgtgtccttgcaaataactgtgacgagcccatgtatgtcaaactggtagaagctctctgtac ggaacatggaatcaacctgctcaaggttgacgacaataagaaactaggggaatgggcaggactatgcaaaatagacaaag aaggcaaagccaggaaaattgttggatgcagctgtgttgttgttaaggactatggcaaagagtcccaagccctggatgta ctcaacgactatttcaagaccaagaagtaa |
|
Protein
| Protein ID | pfu_aug2.0_30.1_00082.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00082.t1 MSICRPTCGPGEARTSDLMVTGPAPLPLHHGADSKTYRGRRSRRVKVYGRQTNVRTKDGLAFKRCSNAGLIMFTLGLLGL RRQAHLCVLANNCDEPMYVKLVEALCTEHGINLLKVDDNKKLGEWAGLCKIDKEGKARKIVGCSCVVVKDYGKESQALDV LNDYFKTKK |
|
| Protein ID | pfu_aug2.0_30.1_00082.t2 |
| Definition | - |
>pfu_aug2.0_30.1_00082.t2 MSICRPTCGPGEARTSDLMVTGPAPLPLHHGADSKTYRGRRSRRVKVYGRQTNVRTKDGLAFKRCSNAGLIMFTLGLLGL RRQAHLCVLANNCDEPMYVKLVEALCTEHGINLLKVDDNKKLGEWAGLCKIDKEGKARKIVGCSCVVVKDYGKESQALDV LNDYFKTKK |
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