Gene
| Gene Model ID | pfu_aug2.0_30.1_00090 |
|---|---|
| Locus | scaffold30.1 : 516069 ... 524542 : + |
| To GenomeBrowser | scaffold30.1:516069..524542 |
| Genes list of scaffold | scaffold30.1 |
| Synonym | pfu_aug1.0_185797.1_06797 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_30.1_00090.t1 | 1 | 1 | HDNR | 1 | 177 | 1.3e-29 | 103.3 | 1.4e-33 | 2.1e-29 | 102.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_30.1_00090.t1 | gi|291241359|ref|XP_002740580.1| | PREDICTED: testis-expressed sequence 36 protein-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_30.1_00090.t1 | gi|524888034|ref|XP_005100594.1| | PREDICTED: uncharacterized protein LOC101851956 [Aplysia californica] | 0.0 |
| pfu_aug2.0_30.1_00090.t1 | gi|676456543|ref|XP_009054358.1| | hypothetical protein LOTGIDRAFT_160937 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_30.1_00090.t1 | gi|260817689|ref|XP_002603718.1| | hypothetical protein BRAFLDRAFT_126880 [Branchiostoma floridae] | 8.00001e-41 |
| pfu_aug2.0_30.1_00090.t1 | gi|390357372|ref|XP_001184205.2| | PREDICTED: testis-expressed sequence 36 protein-like isoform X1 [Strongylocentrotus purpuratus] | 1.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_30.1_00090.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00090.t1 atggcgagaggaagaaaatttgttccatcgccaaacgccgacggcaattggtttgcacatagaggactggacgacactat gtgtaatggggaatttactacgagtaccggatcaatgctaacagcaccgttctctgcagatatcacgaagaggcgaccaa tgcccccaccgcctccattcagggcaaaaacagatttgaactataaaacatccaacaaattttcaatgcatgacaaccgg catgcgttccaggaccatggtgtctactttggtgatggtaaagatgagagaacactaggaaggaaaatcatgctaccaga agtacgtctacatcacacagataaaactttcttaaagcatcatgatagaaaagccatcgatcacgatcttaatacaaatt acggcatatcatatgataagaaggacagtgataacaccacgcgtcgccgatatcccaggaggtataaaacgccacctagt gggccaataaggctcgacaccaccactacaaattggttccgccatcccgacgtgcctcatcgaacaccaacccacgtact agccatctcacaagaaccattcctcaaacataacccatggaaatactctaaccatggaatgaagaaaatttacccgcctt atgatagacagattgaacctctagtcaataaccaatttaacaaatacggcgctgcctatgctatgggtagtgaataa |
|
Protein
| Protein ID | pfu_aug2.0_30.1_00090.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00090.t1 MARGRKFVPSPNADGNWFAHRGLDDTMCNGEFTTSTGSMLTAPFSADITKRRPMPPPPPFRAKTDLNYKTSNKFSMHDNR HAFQDHGVYFGDGKDERTLGRKIMLPEVRLHHTDKTFLKHHDRKAIDHDLNTNYGISYDKKDSDNTTRRRYPRRYKTPPS GPIRLDTTTTNWFRHPDVPHRTPTHVLAISQEPFLKHNPWKYSNHGMKKIYPPYDRQIEPLVNNQFNKYGAAYAMGSE |
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