Gene
| Gene Model ID | pfu_aug2.0_30.1_00091 |
|---|---|
| Locus | scaffold30.1 : 524626 ... 530968 : - |
| To GenomeBrowser | scaffold30.1:524626..530968 |
| Genes list of scaffold | scaffold30.1 |
| Synonym | pfu_aug1.0_11597.1_24924 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_30.1_00091.t1 | 2 | 1 | JAB | 4 | 118 | 1.3e-37 | 127.9 | 7.20001e-41 | 1.3e-37 | 127.9 |
| pfu_aug2.0_30.1_00091.t1 | 1 | 1 | Prok-JAB | 16 | 109 | 1.0e-08 | 34.6 | 1.0e-11 | 1.9e-08 | 33.8 |
| pfu_aug2.0_30.1_00091.t1 | 2 | 2 | JAB | 223 | 255 | 1.3e-37 | 127.9 | 0.7 | 1300.0 | -0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_30.1_00091.t1 | gi|676425481|ref|XP_009044346.1| | hypothetical protein LOTGIDRAFT_177712 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_30.1_00091.t1 | gi|524869325|ref|XP_005091457.1| | PREDICTED: lys-63-specific deubiquitinase BRCC36-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_30.1_00091.t1 | gi|556973630|ref|XP_005994801.1| | PREDICTED: lys-63-specific deubiquitinase BRCC36 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_30.1_00091.t1 | gi|260816942|ref|XP_002603346.1| | hypothetical protein BRAFLDRAFT_277266 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_30.1_00091.t1 | gi|564244745|ref|XP_006261503.1| | PREDICTED: lys-63-specific deubiquitinase BRCC36 [Alligator mississippiensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_30.1_00091.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00091.t1 atggcgatatccagtgttcatctttcgtgtgatgtttacatggtttgctctctccatgccttttctaccgagagagagga agttatgggtttattgataggggagattgacgagaatcgggtgtctcacatctattctgtgattattttacggaggtctg acaaacaaccagacagagtagagatatctccagaacagctctctgatgcatcaacaaaggctgaaaggcttgcacaagag tacaacagaccactaagggtgataggatggtatcactctcacccccacattactgtgtggccctcacatgttgatgtgcg tacccaagccatgtaccaaatgatggatgagggatttatcggcctgatcttttctgtctttaatgaagaaaaattggcat cctctggagataagcaaaacaggattcagttgacatgttttcagtctgtgaatgaatctggggacgattattctccacag tatgctagaatagaggttcctgttcacattgtcccaagctgtggtattagtaaggcgtgtatggagtcgttagaggagct acccatgatcctctgccaggaggaggaggaggcttaccataggacgaccaatcagcagctagatctcatcacaaagatgc acaactcttcagtgtttacaaagtctatttcccatatcatggaggtgatgcatggaccagtaatacaaactgtcgaaaac agactcaaacagaacgaatctagaatagctgaattgaaaaaacagaaagaagaactgcagcgtgaaattgacagtttatg a |
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Protein
| Protein ID | pfu_aug2.0_30.1_00091.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00091.t1 MAISSVHLSCDVYMVCSLHAFSTEREEVMGLLIGEIDENRVSHIYSVIILRRSDKQPDRVEISPEQLSDASTKAERLAQE YNRPLRVIGWYHSHPHITVWPSHVDVRTQAMYQMMDEGFIGLIFSVFNEEKLASSGDKQNRIQLTCFQSVNESGDDYSPQ YARIEVPVHIVPSCGISKACMESLEELPMILCQEEEEAYHRTTNQQLDLITKMHNSSVFTKSISHIMEVMHGPVIQTVEN RLKQNESRIAELKKQKEELQREIDSL |
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