Gene
| Gene Model ID | pfu_aug2.0_30.1_00092 |
|---|---|
| Locus | scaffold30.1 : 533221 ... 551708 : - |
| To GenomeBrowser | scaffold30.1:533221..551708 |
| Genes list of scaffold | scaffold30.1 |
| Synonym | pfu_aug1.0_613.1_07589 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_30.1_00092.t1 | 1 | 1 | CUE | 325 | 363 | 3.4e-09 | 35.9 | 1.9e-12 | 7.1e-09 | 34.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_30.1_00092.t1 | gi|260828221|ref|XP_002609062.1| | hypothetical protein BRAFLDRAFT_283288 [Branchiostoma floridae] | 5.0e-33 |
| pfu_aug2.0_30.1_00092.t1 | gi|524900414|ref|XP_005106627.1| | PREDICTED: ancient ubiquitous protein 1-like [Aplysia californica] | 7.0e-33 |
| pfu_aug2.0_30.1_00092.t1 | gi|548333338|ref|XP_005719521.1| | PREDICTED: ancient ubiquitous protein 1-like isoform X2 [Pundamilia nyererei] | 7.0e-29 |
| pfu_aug2.0_30.1_00092.t1 | gi|499024979|ref|XP_004563244.1| | PREDICTED: ancient ubiquitous protein 1 [Maylandia zebra] | 7.0e-29 |
| pfu_aug2.0_30.1_00092.t1 | gi|554811667|ref|XP_005916688.1| | PREDICTED: ancient ubiquitous protein 1-like isoform X3 [Haplochromis burtoni] | 8.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_30.1_00092.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00092.t1 atggtaaagtggccctgctccgagccggtattgaaccgggatctttggcgtggaataccagagccttaccgagaggcggt ggtgtccccgctatgtgtgactcagcacactgccattgttcaccttgtcgccagtgaagtggccctgctccgagacggta ttgaactgggatcgttggcgtgctcgaataggacatcaaagatcctaacagtattatactttccttttggaatagcccta gtgataataagactgtttataacattacatgctttactggtgacatgcatccttccaaaatcttcaattacaaggtgctc gaataggacatcaaagatcctaacagtattatactttccttttggaatagccctagtgataataagactgtttataacat tacatgctttactggtgacatgcatccttccaaaatcttcaattacaagcacaattttgaagaatatatttggtgtaatt ggaatccatgtcgttgttcaagaagacaaaagacaagagaagaaagccaaagttcttgtatcaaatcatgtgtcaaactt agaccatatggtgatagattttgtcataccaaatataacggtaactatagatgtgagtcaaaacatcctgtcttactaca tccagaaaagacaacaacgaacggatcttgtttactcaagtttagtaaatttcctttttccatgggacaagttcagccaa cttctaccagaggaagtgaaaaaagacaatgaaagtgaagaagaattcagtgagagagtgcggcaagacattgctaattc acttggtattccagcttcagactttacagaaagtgataaattagaatatataaaaaagattgaagaagaggaaaaacaac aagaattaaattctaaagaaacaggatccagtagaaattccatcaatcatatgtctagcggatcttcaggtgaagtatca gaggcgactctagagcagatgtttctacaggtacgagaagtgttacctgatacctcagaggaagtagtcaaacaagatct caggaaaacaagagatgtagatgtaacgatagccaatattttggagggacatgtaacaccagtacaagctagacaaaata tagcatcacagcaacccaagccaacagtgttatcccaaagcagctccgcttcaacggccaagcagaaagtaccgtcaatg tctattaaaagtgatccttctaatcagaaatatggtgcacagacattttcaaatactgcctccagtcgaatgctttctct acaagaaaggaaacagattatgttagcatcagcgagacagcgttacaaagaaaagcatggcctattttatttggctccat attag |
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Protein
| Protein ID | pfu_aug2.0_30.1_00092.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00092.t1 MVKWPCSEPVLNRDLWRGIPEPYREAVVSPLCVTQHTAIVHLVASEVALLRDGIELGSLACSNRTSKILTVLYFPFGIAL VIIRLFITLHALLVTCILPKSSITRCSNRTSKILTVLYFPFGIALVIIRLFITLHALLVTCILPKSSITSTILKNIFGVI GIHVVVQEDKRQEKKAKVLVSNHVSNLDHMVIDFVIPNITVTIDVSQNILSYYIQKRQQRTDLVYSSLVNFLFPWDKFSQ LLPEEVKKDNESEEEFSERVRQDIANSLGIPASDFTESDKLEYIKKIEEEEKQQELNSKETGSSRNSINHMSSGSSGEVS EATLEQMFLQVREVLPDTSEEVVKQDLRKTRDVDVTIANILEGHVTPVQARQNIASQQPKPTVLSQSSSASTAKQKVPSM SIKSDPSNQKYGAQTFSNTASSRMLSLQERKQIMLASARQRYKEKHGLFYLAPY |
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