Gene
| Gene Model ID | pfu_aug2.0_300.1_00561 |
|---|---|
| Locus | scaffold300.1 : 2850 ... 12753 : + |
| To GenomeBrowser | scaffold300.1:2850..12753 |
| Genes list of scaffold | scaffold300.1 |
| Synonym | pfu_aug1.0_53783.1_56157 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_300.1_00561.t1 | 1 | 1 | DUF383 | 106 | 281 | 0.0 | 178.7 | 0.0 | 0.0 | 177.7 |
| pfu_aug2.0_300.1_00561.t1 | 1 | 1 | DUF384 | 285 | 342 | 1.3e-15 | 56.6 | 4.4e-19 | 3.3e-15 | 55.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_300.1_00561.t1 | gi|524888120|ref|XP_005100636.1| | PREDICTED: protein FAM203A-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_300.1_00561.t1 | gi|676442250|ref|XP_009049748.1| | hypothetical protein LOTGIDRAFT_226261 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_300.1_00561.t1 | gi|260810382|ref|XP_002599943.1| | hypothetical protein BRAFLDRAFT_278465 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_300.1_00561.t1 | gi|213515158|ref|NP_001133120.1| | brain protein 16 [Salmo salar] | 0.0 |
| pfu_aug2.0_300.1_00561.t1 | gi|311253283|ref|XP_003125495.1| | PREDICTED: protein FAM203A [Sus scrofa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_300.1_00561.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_300.1_00561.t1 atgagtgttgaggaccttgacagggaacaactggagaaagaattctatccttttctgaatacctcagcaaagaaggaact gaagaacctggctatagaatatttcctgggaataacgggaacagatcaaggaaaggatttcatcggaaagagcgagcctt ttctgaaaggcatcatttcactgacggaagatacagatgttaaaatcgtgcaggatgcgtataaaacattgataaactta acgacaaaacgtgatatttgtaacaggatacgcagctttgatacttttgatgaattcatcaccaaacaattacacctgat tttggacccaagttttgcaaatgctgatggtgcttctgtgtttgtgtcaaatttgactcgccccgaggaatgtgcagcta aagtagcaggcattgttcaaaggaactcacagactatcggagtcgtcaaaattgtgaacgcattatgtaacttacagtac aatataaaggcaaatctacactaccttgcttcagtactggcaaatttgactcaagttaaatccatcagatctgaagtgct tgcacgggaccagtatgtaatacagaagttacttccctttgtggactatcaagactcgtcaatacgacggcatggggtgg tgtgttgtctgaggaactgctgctttgaacctgaacatcatgagtggttgctaggtgaccaggtagatttactgccccgc ctccttctcccattggctggtggtgaggaatttgacgaggacgacacagagaagctccccgatgatctccagtacttacc accagataaacaacgagaaaaggaaccagagatacgcaaaatgcttgtagaaactatatttaagctctgcagtaccaaaa agtgtcgactgtttataaaggataagaacgcttatgttataatgagggagtatcacaagtgggaaccggtcaatgataat gatacgtccatattgaacttgatagacatactgatacaggacgagccagaacctggaatggaaaacctacacgaggtgga aattcctgatgatgtgcagaaaaaatttgaaaaggagctcgcagctgaaaataaataa |
|
Protein
| Protein ID | pfu_aug2.0_300.1_00561.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_300.1_00561.t1 MSVEDLDREQLEKEFYPFLNTSAKKELKNLAIEYFLGITGTDQGKDFIGKSEPFLKGIISLTEDTDVKIVQDAYKTLINL TTKRDICNRIRSFDTFDEFITKQLHLILDPSFANADGASVFVSNLTRPEECAAKVAGIVQRNSQTIGVVKIVNALCNLQY NIKANLHYLASVLANLTQVKSIRSEVLARDQYVIQKLLPFVDYQDSSIRRHGVVCCLRNCCFEPEHHEWLLGDQVDLLPR LLLPLAGGEEFDEDDTEKLPDDLQYLPPDKQREKEPEIRKMLVETIFKLCSTKKCRLFIKDKNAYVIMREYHKWEPVNDN DTSILNLIDILIQDEPEPGMENLHEVEIPDDVQKKFEKELAAENK |
|