Gene
| Gene Model ID | pfu_aug2.0_300.1_00569 |
|---|---|
| Locus | scaffold300.1 : 127096 ... 135242 : + |
| To GenomeBrowser | scaffold300.1:127096..135242 |
| Genes list of scaffold | scaffold300.1 |
| Synonym | pfu_aug1.0_22192.1_04199 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_300.1_00569.t1 | 2 | 1 | Motile_Sperm | 50 | 62 | 6.4e-23 | 80.4 | 1.4 | 7000.0 | -3.4 |
| pfu_aug2.0_300.1_00569.t1 | 2 | 2 | Motile_Sperm | 95 | 183 | 6.4e-23 | 80.4 | 1.3e-26 | 6.4e-23 | 80.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_300.1_00569.t1 | gi|156379135|ref|XP_001631314.1| | predicted protein [Nematostella vectensis] | 4.0e-22 |
| pfu_aug2.0_300.1_00569.t1 | gi|449692838|ref|XP_002170602.2| | PREDICTED: vesicle-associated membrane protein-associated protein A-like, partial [Hydra vulgaris] | 9.0e-22 |
| pfu_aug2.0_300.1_00569.t1 | gi|50540158|ref|NP_001002546.1| | vesicle-associated membrane protein-associated protein A [Danio rerio] | 3.0e-21 |
| pfu_aug2.0_300.1_00569.t1 | gi|159155983|gb|AAI54768.1| | VAMP (vesicle-associated membrane protein)-associated protein A, like [Danio rerio] | 4.0e-21 |
| pfu_aug2.0_300.1_00569.t1 | gi|562824347|ref|XP_006141935.1| | PREDICTED: vesicle-associated membrane protein-associated protein B/C [Tupaia chinensis] | 5.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_300.1_00569.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_300.1_00569.t1 atgatcttacaaacaagacagttagacgatctcataaggcaatcttacaagcaagacaatgaagatgatctcatacgggt gatcttacaaacaagacaatatgacgatttcatgatgccgatcttacaaacgaggctaataagacgatctcatgaagctg accttacgaacaagactaaacgacgaagtcataaaggcgatcttacaaacgaggcgaatgaaggcgatatcataaagaca atctttaaaaaagacaatgaagacaatctcttacaggcgatcttacaaacaagaccttttactgaaatatcgacggtgtc cattaagatatctaatccgtcaaagaagtttgtctacttcaaagtaaagacaactgctccaaagcgctactgtgtaaaac ccaaccaaggcacgctggcacctggtgaaactgtggataccaaaattatgttacaacccattgactttgaaaaagaaaag acaaccttggcgaaacataagtttctggtattgtccatgttcgcctccgacgatgtagccacatcgcagagctcgtcctg ttttacagatgatttcatcagtaaagttcatgatcttgcagattcaatgaggtttcgcgcccagtacagcaaacccacct gttctgaacatgaaaatgaagaactcgatacgttctgtaagacatgctctattagaatatgtgaactatgctgtaaaggg agtcacatgacatgtgattggcaaaggggagacaaatttgtcagggagctgaaacgtacggcagggtcaagaggatctga aatacgtgatatcttatcggatacggctgacacagctgttgtcatggagacagaggaggaataccgcgccctatgccggt ctttgtcgtctgtaaacgttgttggaagaaacaaattctttcctggtcagttatcaccggagactctcaaatctatgttt ggacaagtattatag |
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Protein
| Protein ID | pfu_aug2.0_300.1_00569.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_300.1_00569.t1 MILQTRQLDDLIRQSYKQDNEDDLIRVILQTRQYDDFMMPILQTRLIRRSHEADLTNKTKRRSHKGDLTNEANEGDIIKT IFKKDNEDNLLQAILQTRPFTEISTVSIKISNPSKKFVYFKVKTTAPKRYCVKPNQGTLAPGETVDTKIMLQPIDFEKEK TTLAKHKFLVLSMFASDDVATSQSSSCFTDDFISKVHDLADSMRFRAQYSKPTCSEHENEELDTFCKTCSIRICELCCKG SHMTCDWQRGDKFVRELKRTAGSRGSEIRDILSDTADTAVVMETEEEYRALCRSLSSVNVVGRNKFFPGQLSPETLKSMF GQVL |
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