Gene
| Gene Model ID | pfu_aug2.0_300.1_00574 |
|---|---|
| Locus | scaffold300.1 : 255364 ... 259368 : - |
| To GenomeBrowser | scaffold300.1:255364..259368 |
| Genes list of scaffold | scaffold300.1 |
| Synonym | pfu_aug1.0_3167.1_66593 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_300.1_00574.t1 | 2 | 1 | BTB | 24 | 117 | 4.9e-13 | 49.0 | 5.9e-16 | 2.2e-12 | 46.9 |
| pfu_aug2.0_300.1_00574.t1 | 2 | 2 | BTB | 121 | 149 | 4.9e-13 | 49.0 | 0.23 | 860.0 | -0.1 |
| pfu_aug2.0_300.1_00574.t1 | 2 | 1 | BACK | 132 | 210 | 1.3e-09 | 37.7 | 2.2e-12 | 8.0e-09 | 35.2 |
| pfu_aug2.0_300.1_00574.t1 | 2 | 2 | BACK | 222 | 251 | 1.3e-09 | 37.7 | 0.2 | 740.0 | 0.0 |
| pfu_aug2.0_300.1_00574.t1 | 1 | 1 | PHR | 384 | 538 | 4.2e-19 | 69.1 | 2.2e-22 | 8.1e-19 | 68.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_300.1_00574.t1 | gi|339239617|ref|XP_003381363.1| | BTB/POZ domain-containing protein 6 [Trichinella spiralis] | 3.0e-23 |
| pfu_aug2.0_300.1_00574.t1 | gi|198434541|ref|XP_002120052.1| | PREDICTED: BTB/POZ domain-containing protein 1-like [Ciona intestinalis] | 2.0e-22 |
| pfu_aug2.0_300.1_00574.t1 | gi|242018723|ref|XP_002429823.1| | BTB/POZ domain-containing protein, putative [Pediculus humanus corporis] | 5.0e-22 |
| pfu_aug2.0_300.1_00574.t1 | gi|291241043|ref|XP_002740428.1| | PREDICTED: BTB/POZ domain-containing protein 2 [Saccoglossus kowalevskii] | 2.0e-21 |
| pfu_aug2.0_300.1_00574.t1 | gi|749797695|ref|XP_011152316.1| | PREDICTED: BTB/POZ domain-containing protein 6 isoform X2 [Harpegnathos saltator] | 2.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_300.1_00574.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_300.1_00574.t1 atggcagagggtgggtcaggtccagtagattggagacagggtaaagatgtcctacagtgtaacaagtacatgctggagaa tggtacaggggcagatgttactctcgttgttggaaatagtaaaaaggccatcaaagctcacaggtatatgttgatgtgca ggagtaagtctttgtatgacaagttatcaacatctagttctgctgagttacacatacctgacgtggaaccagacataatg gatgtactgttaaagtccatgtactacaatatgaacaaggtaacacaagtgcaggcctctgctgtgctggcagcttcact gaggtataacctgtatgatctagcagctacctcctcagggatggtaatggatagcatcacccacgacaacgtcttctcta ttctagccatttcttatacaaatgctaatacgacaatcaaggaaaaagcacttgaattcatctataagaactcacagagg tgtttgggatctgatcatttcaaaaacttacctataaaatgtgtggaagatctactgaaaagtgataagataaatttaaa agcagaaagaatatatgagagtgttatgaactgggctgaggcagagtgtttaagacaaggaagaactcccgatgtggcaa ataaaaaaaatgtatgtggtgcagaaatcctcaaagccataaagtttgtagaaatggatgcagcatactttatgcagaac atcagtagatctggtctcttatctcctacagaagaaatcgacattattcatgtcattctcgatccatcaaagcgacagcc gcaagtcacagagacatctactgcaagtacatcagcagctacctcatctccccctggagacacgcagcatcagacgtcag ccaaggcggtagagatggaagaaggacctgctgcaggaacattcaccagatcgctctcagctaatatgggttcttcagct gttgaaatggagtctggagaccagccacgatcaatgatggccataagtggggctggggcagaaaagactctgcccccaag gtcagtaatcccaggtggtccaagccctcgccctcagggcgcccaccctgtaccacatgatgtccatttgggagttggca gaaatggagggcaaaagatagagatccaacgctttaaaggagtactgagcgggaaggcatacatgcgtgataaccatgac ggaatatcgtttataagtaatcataagataaagcttcatggtatctatgtgtatggaagccatcaggtacgagggaaata taacattacaatcaaaatactggaggacaaagtagctcccaatgatgctaacattgtcttacaaaaagccactcccatta aggttgtaaccaaggagatagacaccgacggagtcaccaagcagtacttggtagaggtcaacccacctcaggtcctgaaa gccaacattctgtacaccttagatatgctaatgaaaggtcctgttagtttctatgggagatcaggccaggactttgtcct tgatgatgactctggtgtcatgctgagctttgctcaatatgagttagctctaggtggtaccaatgtagaaattggccagc ttccaggaatggtgattgaagacatggatttttag |
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Protein
| Protein ID | pfu_aug2.0_300.1_00574.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_300.1_00574.t1 MAEGGSGPVDWRQGKDVLQCNKYMLENGTGADVTLVVGNSKKAIKAHRYMLMCRSKSLYDKLSTSSSAELHIPDVEPDIM DVLLKSMYYNMNKVTQVQASAVLAASLRYNLYDLAATSSGMVMDSITHDNVFSILAISYTNANTTIKEKALEFIYKNSQR CLGSDHFKNLPIKCVEDLLKSDKINLKAERIYESVMNWAEAECLRQGRTPDVANKKNVCGAEILKAIKFVEMDAAYFMQN ISRSGLLSPTEEIDIIHVILDPSKRQPQVTETSTASTSAATSSPPGDTQHQTSAKAVEMEEGPAAGTFTRSLSANMGSSA VEMESGDQPRSMMAISGAGAEKTLPPRSVIPGGPSPRPQGAHPVPHDVHLGVGRNGGQKIEIQRFKGVLSGKAYMRDNHD GISFISNHKIKLHGIYVYGSHQVRGKYNITIKILEDKVAPNDANIVLQKATPIKVVTKEIDTDGVTKQYLVEVNPPQVLK ANILYTLDMLMKGPVSFYGRSGQDFVLDDDSGVMLSFAQYELALGGTNVEIGQLPGMVIEDMDF |
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