Gene
| Gene Model ID | pfu_aug2.0_300.1_00577 |
|---|---|
| Locus | scaffold300.1 : 334209 ... 336629 : + |
| To GenomeBrowser | scaffold300.1:334209..336629 |
| Genes list of scaffold | scaffold300.1 |
| Synonym | pfu_aug1.0_9684.1_60643 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pancreas transcription factor 1 subunit alpha | GO:0003407 GO:0003677 GO:0030902 GO:0031016 GO:0044424 GO:0045893 GO:0048699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_300.1_00577.t1 | 1 | 1 | HLH | 64 | 116 | 3.0e-20 | 71.6 | 3.1e-24 | 4.7e-20 | 71.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_300.1_00577.t1 | gi|524900602|ref|XP_005106720.1| | PREDICTED: pancreas transcription factor 1 subunit alpha-like [Aplysia californica] | 2.0e-31 |
| pfu_aug2.0_300.1_00577.t1 | gi|72104716|ref|XP_787068.1| | PREDICTED: pancreas transcription factor 1 subunit alpha-like [Strongylocentrotus purpuratus] | 4.0e-30 |
| pfu_aug2.0_300.1_00577.t1 | gi|564257470|ref|XP_006267688.1| | PREDICTED: pancreas transcription factor 1 subunit alpha [Alligator mississippiensis] | 3.0e-28 |
| pfu_aug2.0_300.1_00577.t1 | gi|558146035|ref|XP_006119596.1| | PREDICTED: pancreas transcription factor 1 subunit alpha [Pelodiscus sinensis] | 4.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_300.1_00577.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_300.1_00577.t1 atggagaattttctttgcgcactggacgaggacttctttgatttttacgacacatctatagaatactcagattccctgga ccctgactcaccgtatagcaacgaatctgatcaggaaaatcagtttttcaatttcaaagttgaccagccttacaaactga aacgaccccatggagtcaagaaaatacagcaacgtaaagctgcaaatcaacgagaaagacgtcgaatgaaatctatcaat gatgcatttgacaatttaagacagtgcattccgagttctctgaatgctgaaagaagactttctaaagttgacactctgag actggccattcggtacatctcgtatctttccgaacttgtccaaagttgttccgattacagcagcgaatcgcctgcaagta aaaaaccacgaacacaagagaaagtcatccttcggtggaatttcacggatccttcagaccaaagcaacgagcaaatgaat cttgtaggacattccctttcctggtccaacgaaaaaccagccaatcaaacggcagataacaaatttacagcaaaaatatg gacaccggaagtaccaactgcagccgaccttatggtgttaaattcctacagtaacgattatcaggaattcatttga |
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Protein
| Protein ID | pfu_aug2.0_300.1_00577.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_300.1_00577.t1 MENFLCALDEDFFDFYDTSIEYSDSLDPDSPYSNESDQENQFFNFKVDQPYKLKRPHGVKKIQQRKAANQRERRRMKSIN DAFDNLRQCIPSSLNAERRLSKVDTLRLAIRYISYLSELVQSCSDYSSESPASKKPRTQEKVILRWNFTDPSDQSNEQMN LVGHSLSWSNEKPANQTADNKFTAKIWTPEVPTAADLMVLNSYSNDYQEFI |
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