Gene
| Gene Model ID | pfu_aug2.0_301.1_03962 |
|---|---|
| Locus | scaffold301.1 : 42020 ... 62185 : - |
| To GenomeBrowser | scaffold301.1:42020..62185 |
| Genes list of scaffold | scaffold301.1 |
| Synonym | pfu_aug1.0_242150.1_35885 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_301.1_03962.t1 | 1 | 1 | NACHT | 286 | 455 | 1.7e-06 | 27.7 | 3.5e-09 | 3.3e-06 | 26.8 |
| pfu_aug2.0_301.1_03962.t1 | 4 | 1 | TPR_12 | 717 | 730 | 3.2e-13 | 49.4 | 0.29 | 270.0 | 1.5 |
| pfu_aug2.0_301.1_03962.t1 | 4 | 2 | TPR_12 | 751 | 793 | 3.2e-13 | 49.4 | 3.8e-07 | 0.00035 | 20.4 |
| pfu_aug2.0_301.1_03962.t1 | 4 | 3 | TPR_12 | 864 | 896 | 3.2e-13 | 49.4 | 0.062 | 57.0 | 3.7 |
| pfu_aug2.0_301.1_03962.t1 | 4 | 4 | TPR_12 | 906 | 953 | 3.2e-13 | 49.4 | 5.0e-10 | 4.6e-07 | 29.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_301.1_03962.t1 | gi|524865532|ref|XP_005089595.1| | PREDICTED: uncharacterized protein LOC101853508 [Aplysia californica] | 0.0 |
| pfu_aug2.0_301.1_03962.t1 | gi|676457650|ref|XP_009054720.1| | hypothetical protein LOTGIDRAFT_232289 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_301.1_03962.t1 | gi|260820908|ref|XP_002605776.1| | hypothetical protein BRAFLDRAFT_121887 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_301.1_03962.t1 | gi|390345012|ref|XP_001186817.2| | PREDICTED: telomerase protein component 1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_301.1_03962.t1 | gi|260832143|ref|XP_002611017.1| | hypothetical protein BRAFLDRAFT_97506 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_301.1_03962.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_301.1_03962.t1 atggctacagggggtggaaccaaaccaaagaaacactctggcaagaagcagaaatctgtcaagatctacataaccacatt tgcagatgaattccatgcagaaagagaatttatgaggaatgaggtattgccagaattaagacaatggacagagtccaaga acttaacaataaaagagtgctttgttaaatggggttcatttcgacctgagaggagggatgtgtgtgagcaagaaaaaatc caaaccagcattgaaaactgttatttcagtgatattatgccaatttttctcaattttaccagtgaatcagtgggatggat ccccatgtgggatgagtatccagatgaatgtgtagaggattttatagaagcgtatggactactggtagaggatctagaag taatgagtggagctttcagggaggacaataaaaactctcttttcctatcaagagatgactcatttctggacaaagtggct gaacaggaaagaaacaagtttctcaagaaatctcctgtggttgatagaattcattcacacggggacaagattgtccaaaa gtttcctagtcatagaatcatcaaatataaagcagaatatggcggtttagaccagaaaaggaaagcgagactcaagtttg atgataatttaaaacaagaaattttagacttttgtattcaaagaatttcatatgattatttcggagaacaacctaaactt tcactcagtgacaatacctcagcaagacaggagcatctagcttttatgagaaacaaaagtgactgtgttataggaaggga taccatgattaaaatgatagaagattacatattaagagaggacaaggatgtaccccttctgcttgttggagaacctggtg tggggaagtcatccattctttgtaaagctgcttgccaaatcaattctatggtagaaaatggccagttcccaaaacatgga gataagtcatggcatgtgttcttccactttgttggtgcagtaccaggatccacttgtatagaaactatgctgaaaagact gctgacagaagtggaaatcttaaatgattctaatataccaaggggtgttgaatcaacagctcagatgtgttgtggacttc tctccaatcctaatacaagacctattatcatatttgttgatgcattaaatcaattttctgatgagcaggctgccagagtg atatcttggttaccacggaaactggcccctcagatacgatgtatattctccatggttgaggactcgtctcaacacaaagt tttaataaacagagaaactaaacccatagagctttcagtaccccctctcaagatagaatccagaaaattgatagtaacag aattcctactacggcataacaaaacattgacagacagacagctggactgcctgctacaaaaagaactctcagctaatctt ctctggctctctgtggcgtgtgaggaactgaaatatctgaacaatcaggaggagatagagaagaaaattcaagagatgcc tgcaggattacccaatctattagagaacttactgatgaggtttgaggacgagactgggggtagtttagttgtggccacac tgtgtctgatagaggcatccacagcaggtctgctggagtctgaacttagagatatcctcggcaatgaaataactcttatg cctccatctccgtttgacgagaaagaagagaaagagtcatctgaaaaggagagttgtaaacataacaatccactgtcaga caggaagtggagggcggtgtttgacacgttaaaaccgtacctccgaccgtatgcggattgtaaaggagggaggcttgatt tctaccacagggctctgagtaaagctgtcaggcataggtattttaagaagacagaagacaaaggaggtacagatgagaag tcagatgctttttactggtggcacaaaaaactggcagattatttcgaacatgttgataacattgacagatatgtcgagga atacttgttccagttggtttcattagaggacacatatcgtttggcagaatgtttgtgtaactggagaatatttgactcac tttatcaggaggagtacagttctaaacttttatcatattggagaaaggttggaacagctggtgaaatgatatctcattat gagaaagctttaaaagcatttgaagagagtaattctgcaaatgaagaggctatatcaatcagatatgagaaagtttgcag ggttgtaatacaagcaggcaaataccacgaagctttggagctactgaaaactgccatgaaaatagaggaaaaggaacttg gtgctagagcttatagaatggtagaactgtatgctctcatggcagagatctatgatgaaaagttgaagttgaatgacttt gtcaatcctagtcagttaccagatttaaagatgactatacattatgggaggaaatctataggaattagaaagacactgcc tggaccatatcataagtttaaacttgccatgagttttatgaagcttgcctttgatatggaaagctgggaggcctgtggcg ggggaccagaaatgagtggagaagaggccctcacagagggaaataaatatattgacaaagctctcaaaatatttgaagag ttgaatgatcagggacattatgctgaagctttgatgacaaagggagtactcgctcctagaggaagtatggaacagctcaa gctctacaaccaagcaaaagacttgtgtatgcaaatgtatggagaataccatatactgacttcaagactgtacatcaata tagggatagtgtatgaagataacaatgaatacaaaaaagcttacgagtatttcaagaaatgggcaagagtgagtgaagaa attcttggacctgatcacccgaaaacgcaacgtgccaaaggagtgctgaaagaaagcaggtataggagaattgctataga acttggagagcttcaagccgataaccaagaaactttcggagatcaagatagtgaagacgaagttgtagaaatgtgccaag aatcacaagaattcccgtctttagacttggaacattactgtgaacaagaggtaggactgaatgataatggagaagttcag ttgaatatacgcagtgatagtaatacgcgggtgatagaacttagtacagaggggtgctccgggccaggaaggcaagtgga aaatacgttaaggtacgaaacacagaataacgaagatgaggatgatgaagatccggaggcgtttatgaatggatatgatg acagaaatccagatgaagatagtgacgacgatagtgatgaagaaaattacgatgataattgtgaggattttgatgagcag tacattttacatggtgatgatattgataatccttttattgaaaacttcaatgtgaatttagaggatgatgacgatgatga agacgatgatgaaatagttcagttgacttctcgagagcccgcagaggaagaggatcatctcagaaactggtaccatgctg gtgataataggtacgaggatgatcgagacggacatgaaaatagcgacgaagatttagacgttgatgagagtgctatagct ggtgtcagtgattcaaacagaacagcaaatgatagggaacagatatga |
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Protein
| Protein ID | pfu_aug2.0_301.1_03962.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_301.1_03962.t1 MATGGGTKPKKHSGKKQKSVKIYITTFADEFHAEREFMRNEVLPELRQWTESKNLTIKECFVKWGSFRPERRDVCEQEKI QTSIENCYFSDIMPIFLNFTSESVGWIPMWDEYPDECVEDFIEAYGLLVEDLEVMSGAFREDNKNSLFLSRDDSFLDKVA EQERNKFLKKSPVVDRIHSHGDKIVQKFPSHRIIKYKAEYGGLDQKRKARLKFDDNLKQEILDFCIQRISYDYFGEQPKL SLSDNTSARQEHLAFMRNKSDCVIGRDTMIKMIEDYILREDKDVPLLLVGEPGVGKSSILCKAACQINSMVENGQFPKHG DKSWHVFFHFVGAVPGSTCIETMLKRLLTEVEILNDSNIPRGVESTAQMCCGLLSNPNTRPIIIFVDALNQFSDEQAARV ISWLPRKLAPQIRCIFSMVEDSSQHKVLINRETKPIELSVPPLKIESRKLIVTEFLLRHNKTLTDRQLDCLLQKELSANL LWLSVACEELKYLNNQEEIEKKIQEMPAGLPNLLENLLMRFEDETGGSLVVATLCLIEASTAGLLESELRDILGNEITLM PPSPFDEKEEKESSEKESCKHNNPLSDRKWRAVFDTLKPYLRPYADCKGGRLDFYHRALSKAVRHRYFKKTEDKGGTDEK SDAFYWWHKKLADYFEHVDNIDRYVEEYLFQLVSLEDTYRLAECLCNWRIFDSLYQEEYSSKLLSYWRKVGTAGEMISHY EKALKAFEESNSANEEAISIRYEKVCRVVIQAGKYHEALELLKTAMKIEEKELGARAYRMVELYALMAEIYDEKLKLNDF VNPSQLPDLKMTIHYGRKSIGIRKTLPGPYHKFKLAMSFMKLAFDMESWEACGGGPEMSGEEALTEGNKYIDKALKIFEE LNDQGHYAEALMTKGVLAPRGSMEQLKLYNQAKDLCMQMYGEYHILTSRLYINIGIVYEDNNEYKKAYEYFKKWARVSEE ILGPDHPKTQRAKGVLKESRYRRIAIELGELQADNQETFGDQDSEDEVVEMCQESQEFPSLDLEHYCEQEVGLNDNGEVQ LNIRSDSNTRVIELSTEGCSGPGRQVENTLRYETQNNEDEDDEDPEAFMNGYDDRNPDEDSDDDSDEENYDDNCEDFDEQ YILHGDDIDNPFIENFNVNLEDDDDDEDDDEIVQLTSREPAEEEDHLRNWYHAGDNRYEDDRDGHENSDEDLDVDESAIA GVSDSNRTANDREQI |
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