Gene
| Gene Model ID | pfu_aug2.0_301.1_03964 |
|---|---|
| Locus | scaffold301.1 : 91187 ... 101035 : - |
| To GenomeBrowser | scaffold301.1:91187..101035 |
| Genes list of scaffold | scaffold301.1 |
| Synonym | pfu_aug1.0_74110.1_27704 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_301.1_03964.t1 | 1 | 1 | YHYH | 72 | 215 | 3.4e-36 | 124.4 | 4.3e-40 | 6.3e-36 | 123.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_301.1_03964.t1 | gi|260819927|ref|XP_002605287.1| | hypothetical protein BRAFLDRAFT_95868 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_301.1_03964.t1 | gi|260805664|ref|XP_002597706.1| | hypothetical protein BRAFLDRAFT_121667 [Branchiostoma floridae] | 6.00036e-42 |
| pfu_aug2.0_301.1_03964.t1 | gi|115625820|ref|XP_001189765.1| | PREDICTED: uncharacterized protein LOC755406 [Strongylocentrotus purpuratus] | 4.00001e-41 |
| pfu_aug2.0_301.1_03964.t1 | gi|390360689|ref|XP_003729748.1| | PREDICTED: uncharacterized protein LOC100892824 [Strongylocentrotus purpuratus] | 3.0e-40 |
| pfu_aug2.0_301.1_03964.t1 | gi|115947233|ref|XP_789379.2| | PREDICTED: uncharacterized protein LOC584428 [Strongylocentrotus purpuratus] | 1.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_301.1_03964.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_301.1_03964.t1 atggggataactaggtacttatccctattgttgctgtcgatgacacaatctgcggctttgacatctacagaaatcagtgc ttttactgtctctggatcgtatagtgctactgtcaacgtcaatcaaagtccttcggacaagtacatcataacagcgagtg gtatgcccgaccatgcatggcaaagagttaatccgaacactccgacggatcaaaactataacctcgatatcccaaagacc cctacagcacagacaacaccaggatgcctacccatgggtatgattggtatcgcccgtacgggagtggcaatattcaaccc tctgacctcctcgtacttgaatgcagttgaaggatcagacgcagagacttttgacacatgtgacgggcatgctgataata gggggacatatcattaccacaaacatccctctagctgtctggatggtggaactgttgacgaatttataggtgtagcgatg gacggctaccccatctacagtccaaaagcatcatggaagtccagtggaagtgtggccgtgaccactgccgatcttgatca atgtcatggcaaggaggtcaatggagaatacagatactacatgacggctgattggccatatgtattgggatgttttaaag gatctgtcatccatccaactattcgaacagaatataactgtgggagcacttcgggatatgatggaagctggggttacatg tgctcttgtgttggcgatgataataacaaatctcctgagaccatccgtaccagcaccccgctcatattctttgtcgtttt tatttatattttgggtgcactggttgcacacatcaattaa |
|
Protein
| Protein ID | pfu_aug2.0_301.1_03964.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_301.1_03964.t1 MGITRYLSLLLLSMTQSAALTSTEISAFTVSGSYSATVNVNQSPSDKYIITASGMPDHAWQRVNPNTPTDQNYNLDIPKT PTAQTTPGCLPMGMIGIARTGVAIFNPLTSSYLNAVEGSDAETFDTCDGHADNRGTYHYHKHPSSCLDGGTVDEFIGVAM DGYPIYSPKASWKSSGSVAVTTADLDQCHGKEVNGEYRYYMTADWPYVLGCFKGSVIHPTIRTEYNCGSTSGYDGSWGYM CSCVGDDNNKSPETIRTSTPLIFFVVFIYILGALVAHIN |
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