Gene
| Gene Model ID | pfu_aug2.0_301.1_03966 |
|---|---|
| Locus | scaffold301.1 : 190029 ... 206850 : - |
| To GenomeBrowser | scaffold301.1:190029..206850 |
| Genes list of scaffold | scaffold301.1 |
| Synonym | pfu_aug1.0_4985.1_52419 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_301.1_03966.t1 | 1 | 1 | DM | 24 | 70 | 1.9e-23 | 81.6 | 8.1e-27 | 4.0e-23 | 80.6 |
| pfu_aug2.0_301.1_03966.t1 | 2 | 1 | DMA | 105 | 112 | 7.7e-13 | 48.0 | 0.097 | 480.0 | 0.7 |
| pfu_aug2.0_301.1_03966.t1 | 2 | 2 | DMA | 208 | 242 | 7.7e-13 | 48.0 | 1.3e-15 | 6.3e-12 | 45.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_301.1_03966.t1 | gi|291229056|ref|XP_002734495.1| | PREDICTED: doublesex- and mab-3-related transcription factor A2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_301.1_03966.t1 | gi|734618763|ref|XP_010737148.1| | PREDICTED: doublesex- and mab-3-related transcription factor A2 isoform X2 [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_301.1_03966.t1 | gi|734618761|ref|XP_010737147.1| | PREDICTED: doublesex- and mab-3-related transcription factor A2 isoform X1 [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_301.1_03966.t1 | gi|657586917|ref|XP_008297727.1| | PREDICTED: doublesex- and mab-3-related transcription factor A2 isoform X1 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_301.1_03966.t1 | gi|657586919|ref|XP_008297728.1| | PREDICTED: doublesex- and mab-3-related transcription factor A2 isoform X2 [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_301.1_03966.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_301.1_03966.t1 atgagttcagatgacgagaagggtgactctttcaactcttcatttatgagggctgcagatcggtacccaagaaccccgaa atgtgcaaggtgcaggaaccacggggtggtgtcagcactgaagggccacaaaaggtactgtagatggagagactgtgttt gtgcaaaatgtactcttatagcagaaagacagagggtcatggcagctcaagttgctctgaggagacagcaagcacaagaa gaaaatgaagcaagagagctcggcatgctttacggaccgaatggcctcttacaaataaatccagaacatgtaaccatctt tccaaacaacaagaaattcatagagcctagtagtacattagatgacagagaagacgatgcccctgctgtaaaaagattga agactgatgacagtaatgacaaaagaaatgcctcgccgcattcacattgttcatcgcccgacagattggaaagggcgcat tcccctgccgaatcgactggatcgcacaacgagtcaagatattcggatcccccttcaccaaattttgacatccgtggcga gaacagtacaaaatcttcggaaagtggctctgacaaatctacaaatggcaagaaaaactatctagacgttctcagtcgta tttttccacaaatgaaaagaagcgtgctacaattaattctacaagggtgcaataatgacatggtgcaagcaattgaacag gttttgagcaaccacaatagcgatgagactacatcatcatcggccatcagcacgtcatctccatttctaccgacactcgg aaccacttctatgagttcttcagctttcaagtctgcattttcaccaatttcgacaatacccaatgcgcattcactcagtg ctatgaggtatgcctggggagggataggggctagaggtttgctatccatgcccttacccccggcgataccaggacttgcc atgagtggggcatacgctcgttaccctactggactgtcctccgctaccggatccgaaccctttcattatgctatatttgt aacgacggcagatgttattcgggatatcagcaccattaagttattaaatttgaaagtacaaaatcgacaattcagaaaat caaaaaccgaaggcatacaaaatcaggataaaaaaggaactaaaggaaacaaacaaaaacctccaccacatgaaaagaag cgaactcccgatatggaagtgagaccaggtgcctcggaagagaataaaacaaaggtggggatctccaacaacaccaggct acagcacccacagcaaaaccccaaaacacccaatgcaacaacacagagcagacaagcacagaaagagatgcaaaagggac aaggaacgtcaacgcacaacacagaaataccaacgagaccattgggcaaccggtgccgacttacgacggccatctgccac ggaaatagcagaaggtgtggttatcctggattacgtgcgcacaacactcccacttttaactag |
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Protein
| Protein ID | pfu_aug2.0_301.1_03966.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_301.1_03966.t1 MSSDDEKGDSFNSSFMRAADRYPRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQE ENEARELGMLYGPNGLLQINPEHVTIFPNNKKFIEPSSTLDDREDDAPAVKRLKTDDSNDKRNASPHSHCSSPDRLERAH SPAESTGSHNESRYSDPPSPNFDIRGENSTKSSESGSDKSTNGKKNYLDVLSRIFPQMKRSVLQLILQGCNNDMVQAIEQ VLSNHNSDETTSSSAISTSSPFLPTLGTTSMSSSAFKSAFSPISTIPNAHSLSAMRYAWGGIGARGLLSMPLPPAIPGLA MSGAYARYPTGLSSATGSEPFHYAIFVTTADVIRDISTIKLLNLKVQNRQFRKSKTEGIQNQDKKGTKGNKQKPPPHEKK RTPDMEVRPGASEENKTKVGISNNTRLQHPQQNPKTPNATTQSRQAQKEMQKGQGTSTHNTEIPTRPLGNRCRLTTAICH GNSRRCGYPGLRAHNTPTFN |
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