Gene
| Gene Model ID | pfu_aug2.0_301.1_03968 |
|---|---|
| Locus | scaffold301.1 : 260793 ... 275540 : - |
| To GenomeBrowser | scaffold301.1:260793..275540 |
| Genes list of scaffold | scaffold301.1 |
| Synonym | pfu_aug1.0_4985.1_52416 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_301.1_03968.t1 | 2 | 1 | fn3 | 593 | 669 | 1.0e-08 | 35.2 | 1.3e-11 | 2.1e-08 | 34.1 |
| pfu_aug2.0_301.1_03968.t1 | 2 | 2 | fn3 | 734 | 749 | 1.0e-08 | 35.2 | 8.1 | 13000.0 | -3.7 |
| pfu_aug2.0_301.1_03968.t1 | 1 | 1 | Pkinase_Tyr | 780 | 1036 | 0.0 | 219.8 | 0.0 | 0.0 | 219.1 |
| pfu_aug2.0_301.1_03968.t1 | 1 | 1 | Pkinase | 781 | 1034 | 3.1e-28 | 98.6 | 3.7e-31 | 6.1e-28 | 97.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_301.1_03968.t1 | gi|585685177|ref|XP_006820089.1| | PREDICTED: uncharacterized protein LOC102806247, partial [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_301.1_03968.t1 | gi|585674469|ref|XP_006818613.1| | PREDICTED: uncharacterized protein LOC102807323 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_301.1_03968.t1 | gi|260811460|ref|XP_002600440.1| | hypothetical protein BRAFLDRAFT_99630 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_301.1_03968.t1 | gi|585674473|ref|XP_006818614.1| | PREDICTED: uncharacterized protein LOC102807569, partial [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_301.1_03968.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_301.1_03968.t1 atggatctccggtactcgtacggaacatatccgttcttaactagtcgcgaaacgtgttcccatctgaatccctgttttcc gggaaattgtacatcggattctcagtgtcattgtcaggatggattcaatggcacttcttgtcttcaaatgtcgtcgctgg aagccccagatatgtcaacttttaccactgccttgtacaatatacgccgagacgatgacaaagaattatacaaatatagt acggatgcttttgaacagaatgggacatcttttggtgaggtatggtcgaaggagaaagactacaactacttcaacattga attggaaggactgtttgaggaaccacaggttgaagactttcctagttatgtgggcaacttttcttttggcgttgtgtcag ccaccgtaaatcttctgttgaccaaaactccacgtcaagacggagaccctatagtaactgcattggatgaatcatacaac tgttccaacaaagtctattcctcaacggcagtgtccattaattacccagtcactggggtactgaaatgttccatcaccaa cccagagttttctacgctaataaaccatggcgacaatttcaccgtgacagcaacactgaagagtggtggatttagggatc taataaataggaatgacgatagctaccatagtcgggagtattatgaaggtcttacaacatcaaagacattgctgttccaa tttgactttaggaagccttatcattgtaaacagaacggcacgtgtgctgatttaccactagaaatagcgaacgacgtaac aaaggaaatgctacaattccgttggagtggttggaaagatgatctgtcatacgtatatcgttatacttgggaaatccata agttggaacctgatagaacaagtgatcaaaatcttgtagagcctgagccaatgagacctatcaaccacacagaaatttta gctgagtattatacggacagttcatttatttcctacactccaccagaaccaggtgtttattctcttattttggaagttgc cgacaaggcaaacaattcagtctttgccagacagatcttcatctttgatccagagtctaatgtaagcataaatgtcgata gaaggatggtagtatctagtgccaatccaaggactgattatttgtggcagaatgatatacaagaggagaacagcactggt gcccctgttgtagtgacttggaagaaccattttgaaaacagaatgcataaggagaataagtttttgaacaaagtaaatac ctacccacaagcagtgttagaaactggttattcatcaagacctacaagagttgtgaaatcggtagctcaagaatttgacg ataaaaacagcctgagaacgatagataaagtcccaaatagcaatggtgttgttcagtttaacgttgcttttaaaatagac catgaaggaggggcttcaatccagactcctccagatgacaatgagtttttggaaattactgatccttcattagatcatca ttctatcaatgcgacaagaaaagacggtgacactatgcatatttgggttaaagcacgagatataatgggaaacgagaaca tggacgacatgatattacactttgactcatcacctcctattgtgaacaacgttacgctagagagaaaccaggaaaatgga acttttcctttctcaagcagggccatgctgtttgatacatttgaacaacaggttgttgatttactagaattcaatggaat tcaagaatacacgggtgtgaccaacattcagattgtggcaagaacatcaacaacaatcggtctcacctgggatatagaac cttcctgctacgaggtcacgggaatgacacttgtgtatcgctcaagtaatggtcaatcaaaatctgttacaataccacta gaatttgattcgtataccattcatgggctggaatctggaagtaattataccattgagatattttctctgtatgattcggg aagatcagagcgttacgtcatttccgctaaaacagaaacagatgatggtgctatcccaattgctttggtagccggagcct ctggatcagcaatggtagttctagtcgtgatattggtagttgtcataatcctcatgaggacaggacggatgaatgaagcc aagcagaaagcgaagaaacgtcttacgcaatacatagtcagaccaataaccacctataacatgcgcttcaacagaaggac aggtgtgtacagtggttctttagatgatgatatatacgctctcggtaacattatactggagaacgatgaggcgtatttgg tcagctttgatgacgtagcactccaggagaagataaagattggtcattttgctgatatttacacagcaaaattcgaaaac aagacagtcgtggcgaagcttttaaaaagtggatatagtgaacaggattctgtggtgatgagggctaaaattaatttctt tgcccaggaacaattggaacacgaaaatgttctcgccttcttgggagcagttctaaatcatccacaatttggtgcttatc ttctcttggaatattgtgaggaaggttctcttctcagatggctgaagaaacaccgaggcaaagttaatgaagacctcatt gagaaaatgtgcaatatgtgcttcggtatagccaagggaatggcttatttggaatctaaaaatgtagtacacaaacgtct gggagcaaggaatatttacctaatgtccgacctagaaccaaaagtggctggattcggaccgacgccacagctgcaagaaa atgaagacccaaatagtacaggaaaagagagaatacctgtaaaatggacagccattgaatgccttgttgatccagagaat gcaacttcagcctctgatgtgtggtcatttggcatcctgatctgggaaatgttttctattggtgatgagccctatcctgg aattagaaacaagcaagttgtcagtaaggttaaaggcggatacagaatgaaacgaccagagtactgcccagaatcgttgg gggagaccatgagtgaatgctggctggaggtgccctcacagagacctaaatttgacaagatggccgccaacatggaacat ctgtacagcaactatgccgattttgtgtaa |
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Protein
| Protein ID | pfu_aug2.0_301.1_03968.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_301.1_03968.t1 MDLRYSYGTYPFLTSRETCSHLNPCFPGNCTSDSQCHCQDGFNGTSCLQMSSLEAPDMSTFTTALYNIRRDDDKELYKYS TDAFEQNGTSFGEVWSKEKDYNYFNIELEGLFEEPQVEDFPSYVGNFSFGVVSATVNLLLTKTPRQDGDPIVTALDESYN CSNKVYSSTAVSINYPVTGVLKCSITNPEFSTLINHGDNFTVTATLKSGGFRDLINRNDDSYHSREYYEGLTTSKTLLFQ FDFRKPYHCKQNGTCADLPLEIANDVTKEMLQFRWSGWKDDLSYVYRYTWEIHKLEPDRTSDQNLVEPEPMRPINHTEIL AEYYTDSSFISYTPPEPGVYSLILEVADKANNSVFARQIFIFDPESNVSINVDRRMVVSSANPRTDYLWQNDIQEENSTG APVVVTWKNHFENRMHKENKFLNKVNTYPQAVLETGYSSRPTRVVKSVAQEFDDKNSLRTIDKVPNSNGVVQFNVAFKID HEGGASIQTPPDDNEFLEITDPSLDHHSINATRKDGDTMHIWVKARDIMGNENMDDMILHFDSSPPIVNNVTLERNQENG TFPFSSRAMLFDTFEQQVVDLLEFNGIQEYTGVTNIQIVARTSTTIGLTWDIEPSCYEVTGMTLVYRSSNGQSKSVTIPL EFDSYTIHGLESGSNYTIEIFSLYDSGRSERYVISAKTETDDGAIPIALVAGASGSAMVVLVVILVVVIILMRTGRMNEA KQKAKKRLTQYIVRPITTYNMRFNRRTGVYSGSLDDDIYALGNIILENDEAYLVSFDDVALQEKIKIGHFADIYTAKFEN KTVVAKLLKSGYSEQDSVVMRAKINFFAQEQLEHENVLAFLGAVLNHPQFGAYLLLEYCEEGSLLRWLKKHRGKVNEDLI EKMCNMCFGIAKGMAYLESKNVVHKRLGARNIYLMSDLEPKVAGFGPTPQLQENEDPNSTGKERIPVKWTAIECLVDPEN ATSASDVWSFGILIWEMFSIGDEPYPGIRNKQVVSKVKGGYRMKRPEYCPESLGETMSECWLEVPSQRPKFDKMAANMEH LYSNYADFV |
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