Gene
| Gene Model ID | pfu_aug2.0_301.1_03969 |
|---|---|
| Locus | scaffold301.1 : 287731 ... 330454 : + |
| To GenomeBrowser | scaffold301.1:287731..330454 |
| Genes list of scaffold | scaffold301.1 |
| Synonym | pfu_aug1.0_3636.1_08672 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_301.1_03969.t1 | 2 | 1 | Y_phosphatase | 970 | 1159 | 0.0 | 305.0 | 0.0 | 0.0 | 204.4 |
| pfu_aug2.0_301.1_03969.t1 | 2 | 2 | Y_phosphatase | 1219 | 1445 | 0.0 | 305.0 | 7.5e-32 | 1.1e-28 | 100.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_301.1_03969.t1 | gi|170596901|ref|XP_001902938.1| | EGF-like domain containing protein [Brugia malayi] | 0.0 |
| pfu_aug2.0_301.1_03969.t1 | gi|585659292|ref|XP_006885988.1| | PREDICTED: multiple epidermal growth factor-like domains protein 6 [Elephantulus edwardii] | 6.00036e-42 |
| pfu_aug2.0_301.1_03969.t1 | gi|597765033|ref|XP_007246424.1| | PREDICTED: multiple epidermal growth factor-like domains protein 6-like, partial [Astyanax mexicanus] | 9.99995e-41 |
Transcript
| Transcript ID | pfu_aug2.0_301.1_03969.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_301.1_03969.t1 atgatggtgatacaagcagcaatcgcatgttttctattatttcattttgccgaatcagctacctttgaaaattgcgaagg cctaaactgtacgtcatgtcagattggttggtatggagacgaatgtgagctcgcttgtggtaactgtggagatgatcgta gatgtgatagagactctggttactgcaacagtagttcctgtcagcctgggtactttggaagaaattgcacaaggcaatgt cctataaactgtcatgaacgaaaatgcgacttcaatacaggcgaatgcatggagtgcatgaattcttattatggggaatt ttgcgacacaaagtgtccaaataattgcctttcttgtacaaatgctacatattgcacttcgtgtaagattgggtggtatg gagaagaatgtgagctcacttgtggtaactgtggagatgatcgtagatgtgatagagactctggttactgcaacagtagt tcctgtcagcctggttattttggaagaaattgcacgaggcaatgtcctacaaactgtcatgaacgaaaatgcgacttcaa tacaggcgaatgcatggagtgcacaaattcttattatggggaattttgcgacacaaagtgtccaaataattgcatttctt gtacaaatgctacatattgctcttcgtgtgagattggttggtacagttcgtattgctctttgaattgttcacactgtgga ggtaccggaaaatgcaacaaagctgatggtcgatgcatcagtaattcatgtcagaacagatattatgggtcgaagtgtaa tcaaaggtgttcagatcaatgcaaaggtgatcgttcttgtgacttttctacgggtaaatgtaagcaatgtccgcttgcta aatatggaatctcttgtgacagaaattgccctattaactgtgacaagtgtgaaaatgatcaggtatgcaatacatgtgcg gagggattttatggagatacttgtaataaaaaatgtactggatgcggaggaaatggccgttgcagaagatctagtggtat atgcgatatgtcgtcatgtaaaccaaaatattacggaaagcaaaataatgatgtaaaatgtgataaggactgtcctactc agtgtagcggtaatgggtcatgtcatatattttttggtacatgcaatggatgcaaaaataaatattggggattacattgt gatcaacagtgttctcaaaattgtggtggtgatggttcatgtaagatgctttctggtacttgcattaatgcatgcaacat aaaatattggggatctttgtgtgataaagactgcccttctaattgtggtggtaatggtttgtgtgatatcttaagtggaa cctgcaaatttggctgcaaacctcgattttgggatttgaaatgcgatcgagactgcccttcaaactgtggcggtgatggt tcctgtaatatctcttatagtacctgcaagtctggttgcaaaccaggacattggggaagtcgatgtgatcaaacctgttc tttaaaatgtggcggtgatggttcatgtacatttcgtagtggttcctgcagttcaggatgtaaacctggatattgggggc tgagatgcgatcgggcctgccatgcaaaatgtggcggtgatggctcgtgtaatatctctaatggtgattgcatgtctggc tgcgaatcaggatattggacgagtaaatgcgatcaaatctgtccaagaaactgtggtgttgatcgttcatgtaatattcg taatggttcctgtagtaaaggatgtaaacctagtttttgggggcagaaatgtgatcagtcttgtcctttaaagtgcggag gtgatggttcatgtaaacagcattccaaaatgtgcgaggaaggatgtaggcccggttacatgggatcattttgtaatgaa tcctgttcatcaaactgtaaaaataaatcatgtaatagaaatactggttattgcttacataattgtactgacggatggtt tggttcgcaatgtaagaaagcttgcccaatctattgtggcaaagagagatcatgtgacagagcaagcggcgaatgctcaa atgattgtaaagaggaatggttcggcatgtattgtaataaaagttgtccagtgaattgtgctgatagcaaatgtaacaga ttaagcggtgaatgctcaaatgattgtaaagaggaatggttcggcacgtattgtaataaaagttgtccaatgaattgtgc tgataaaaaatgtaacagatcaagcggtgagtgtattaatgaatgtaaggagggttggtttggacagcactgcaacaaat catgtcctggtaactgtgcagatggctcgtgcaaaaaacttgacggtacatgtataaaagaatgtacaacatcattttat ggcgctcaatgtacacttgattgcccactaaactgttacggagacaggtcttgtcatagagaaagtgggatatgtaatta tggatgtactccaggatggactggatcacattgtaaatcagaaaacaaggcggatgttatggattccattgcagtggtcc ttattgtcgtggcagttattattctgattattactattgttattgtgctggtcttgatcagaaaaagagattacagtaaa gagaaggcgaataaggcatcgggtgctgatggtgttgaactcattgcaggatcagatacagtcgaagatgaacttggaac tctaagccaaactggagatgctgcagaacagggaacttctcagcttgggactatcgatgatcttgaaaagatatactgta acaccgttgaaactacgaaaggcattccagtatctcagctaaaagcctatttcactgagaatcgacataacaagaaattc gaagaggaatttaaggatgcgagtggaatcaaaaagtacattgcagcacaaggtccaattcaaacaaccattgaggattt ttggcagatgatatgggaaagcaacattgataaaatagtgatgttgacgaaccttgtggaaggaggaaagaaaaagtgtg aacaatactggccaaatccaaatgagaaaactacacatggaaaatttggattgacattgaaggatgagagaatattctca tattacactctacgagaggtggaaattattgacaataagtcgaaacaaaaaagagaaattcttcattaccatttcacaac atggcctgaccacggtacaccagatcctctactcctcattctttttcataaacgtgttatcgctactaaggcaaagtacg atggacctattctcgtacattgcagtgccggtatcggtcgaacaggaacatttattgcattggatgctttagacagccaa ggagcaaacactggtatcgtggacattgagaactatgtgagaattatgagaaaagacagattgaatatgatacagacctc agaacaatataaagtgttgcacgaggctttagtcgaggctttccagtggcatgacacgtctatatcaatggacgaatttc catctgtgtggaaatccttagactccgacaacagcccgataaatcaacaacatctgaaaaaagaatatgacaaactactt gaaatgaaaaccctgcgtggagaagagacgtctataacagctttgaaagaagaaaacaaattaaagaacagaacagtcaa catattgcctttggacaaatatcgtccctacttaacttcacatctaagtggggcaaatgactacattaattctgtgatca ttccgactcagatgtctatagaagctttcatggtgacacaactaccactacaggggactattgtagacttctggaggcta atatctgatcaagactcacactgtattgtttacttcgcatcatcgtcagatgttgagattagtttctttcctgcaaatga cgattctttagaaacaagaatgcatcttatacaaaaggagtcaatgacatccatacaagaaggagtagaagaaataaact taattgtgaaaaacaaggaaaataaccaaactgcagatgttctgatgctgaaaatgaaaatggacgacataagtttccca tcagcctcacatattttcagagcggcagaagtggttgaactgcagaggagaagatttaagaactcgccatgtacaatagt ttcgctagacggatgtacaccctgtgaagtgttctgcgcattcagcgatgtaacggaatacatgaaggtagataacaaaa tagatgtcttccaaacagcaaggcaactacaaattagaagaccagagttcttcggcaaatttgaaacgtatcgatattgt taccaaaccatcaacgagtaccttatgacacagaacgtttattgcaacaattag |
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Protein
| Protein ID | pfu_aug2.0_301.1_03969.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_301.1_03969.t1 MMVIQAAIACFLLFHFAESATFENCEGLNCTSCQIGWYGDECELACGNCGDDRRCDRDSGYCNSSSCQPGYFGRNCTRQC PINCHERKCDFNTGECMECMNSYYGEFCDTKCPNNCLSCTNATYCTSCKIGWYGEECELTCGNCGDDRRCDRDSGYCNSS SCQPGYFGRNCTRQCPTNCHERKCDFNTGECMECTNSYYGEFCDTKCPNNCISCTNATYCSSCEIGWYSSYCSLNCSHCG GTGKCNKADGRCISNSCQNRYYGSKCNQRCSDQCKGDRSCDFSTGKCKQCPLAKYGISCDRNCPINCDKCENDQVCNTCA EGFYGDTCNKKCTGCGGNGRCRRSSGICDMSSCKPKYYGKQNNDVKCDKDCPTQCSGNGSCHIFFGTCNGCKNKYWGLHC DQQCSQNCGGDGSCKMLSGTCINACNIKYWGSLCDKDCPSNCGGNGLCDILSGTCKFGCKPRFWDLKCDRDCPSNCGGDG SCNISYSTCKSGCKPGHWGSRCDQTCSLKCGGDGSCTFRSGSCSSGCKPGYWGLRCDRACHAKCGGDGSCNISNGDCMSG CESGYWTSKCDQICPRNCGVDRSCNIRNGSCSKGCKPSFWGQKCDQSCPLKCGGDGSCKQHSKMCEEGCRPGYMGSFCNE SCSSNCKNKSCNRNTGYCLHNCTDGWFGSQCKKACPIYCGKERSCDRASGECSNDCKEEWFGMYCNKSCPVNCADSKCNR LSGECSNDCKEEWFGTYCNKSCPMNCADKKCNRSSGECINECKEGWFGQHCNKSCPGNCADGSCKKLDGTCIKECTTSFY GAQCTLDCPLNCYGDRSCHRESGICNYGCTPGWTGSHCKSENKADVMDSIAVVLIVVAVIILIITIVIVLVLIRKRDYSK EKANKASGADGVELIAGSDTVEDELGTLSQTGDAAEQGTSQLGTIDDLEKIYCNTVETTKGIPVSQLKAYFTENRHNKKF EEEFKDASGIKKYIAAQGPIQTTIEDFWQMIWESNIDKIVMLTNLVEGGKKKCEQYWPNPNEKTTHGKFGLTLKDERIFS YYTLREVEIIDNKSKQKREILHYHFTTWPDHGTPDPLLLILFHKRVIATKAKYDGPILVHCSAGIGRTGTFIALDALDSQ GANTGIVDIENYVRIMRKDRLNMIQTSEQYKVLHEALVEAFQWHDTSISMDEFPSVWKSLDSDNSPINQQHLKKEYDKLL EMKTLRGEETSITALKEENKLKNRTVNILPLDKYRPYLTSHLSGANDYINSVIIPTQMSIEAFMVTQLPLQGTIVDFWRL ISDQDSHCIVYFASSSDVEISFFPANDDSLETRMHLIQKESMTSIQEGVEEINLIVKNKENNQTADVLMLKMKMDDISFP SASHIFRAAEVVELQRRRFKNSPCTIVSLDGCTPCEVFCAFSDVTEYMKVDNKIDVFQTARQLQIRRPEFFGKFETYRYC YQTINEYLMTQNVYCNN |
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