Gene
| Gene Model ID | pfu_aug2.0_302.1_07326 |
|---|---|
| Locus | scaffold302.1 : 225421 ... 251025 : - |
| To GenomeBrowser | scaffold302.1:225421..251025 |
| Genes list of scaffold | scaffold302.1 |
| Synonym | pfu_aug1.0_18.1_14720 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glycerol-3-phosphate mitochondrial isoform x1 | GO:0008152 GO:0052590 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_302.1_07326.t1 | 1 | 1 | DAO | 70 | 438 | 0.0 | 167.2 | 0.0 | 0.0 | 166.6 |
| pfu_aug2.0_302.1_07326.t1 | 1 | 1 | FAD_binding_2 | 70 | 293 | 9.5e-06 | 24.6 | 1.8e-07 | 0.00014 | 20.8 |
| pfu_aug2.0_302.1_07326.t1 | 3 | 1 | EF-hand_8 | 365 | 376 | 9.0e-06 | 25.2 | 6.4 | 5000.0 | -2.8 |
| pfu_aug2.0_302.1_07326.t1 | 3 | 2 | EF-hand_8 | 612 | 630 | 9.0e-06 | 25.2 | 7.0 | 5400.0 | -3.0 |
| pfu_aug2.0_302.1_07326.t1 | 1 | 1 | EF-hand_7 | 628 | 685 | 1.5e-12 | 47.4 | 4.7e-15 | 3.7e-12 | 46.2 |
| pfu_aug2.0_302.1_07326.t1 | 2 | 1 | EF-hand_1 | 629 | 651 | 3.5e-06 | 25.9 | 4.1e-05 | 0.032 | 13.5 |
| pfu_aug2.0_302.1_07326.t1 | 3 | 3 | EF-hand_8 | 636 | 685 | 9.0e-06 | 25.2 | 6.4e-08 | 5.0e-05 | 22.8 |
| pfu_aug2.0_302.1_07326.t1 | 2 | 2 | EF-hand_1 | 661 | 685 | 3.5e-06 | 25.9 | 0.00066 | 0.52 | 9.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_302.1_07326.t1 | gi|676438531|ref|XP_009048560.1| | hypothetical protein LOTGIDRAFT_238523 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_302.1_07326.t1 | gi|115942939|ref|XP_782036.2| | 0.0 | |
| pfu_aug2.0_302.1_07326.t1 | gi|524915200|ref|XP_005112405.1| | PREDICTED: glycerol-3-phosphate dehydrogenase, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_302.1_07326.t1 | gi|242014895|ref|XP_002428118.1| | glycerol-3-phosphate dehydrogenase, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_302.1_07326.t1 | gi|195026584|ref|XP_001986290.1| | GH21279 [Drosophila grimshawi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_302.1_07326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_302.1_07326.t1 atgaggaactttggtgtgtttcttaagagactagccaaggctggtgcagtggttggtgtagggggatgtgtggtaggcta tgtcaccatcaaatacctacaggtgccccccagtcgtccggtgttggcagatgaggataacaagtatgcttgggcacctt taccatccagacagcaactatggaactcactggagaaagaagaatttgacgtgctagtggtgggtgggggtgccacaggg tgtggtgtagcttttgatgctgtaagcagaggtcttaaaacagccttggttgagaagtttgattatggagcgggcacaag cagtagaagtacaaagctgatccatggtggagtcagatatctagagaaagctgtcttcaatcttgacattgaacagtaca gaatggtcaaagaggctctgagtgagagagcaaacttgattcaaattgctccacatttggcataccctttcccaataatg ttacctatttataaactctggcaggtaccctatttctgggcaggaattaagtcgtatgatttagtggccggcaaacagct tctccatcgtagtttctatcttagtaagaaaaaagcactagaaaaattccccatgttaaagaaggatgcacttgtagggg cattggtatattatgatggtcagcatgacgatgccagaatgaacattgcgattgctatgtcagccattagaatgggtggt tccttgctcaactacacagaagtggtggaaatacataaatctaaggacagcactggtaaagatgtggtgtctggggccaa aatcagggacagaattacagggaaagaggtagatgtaaaagctaaatgtgtggtcaacgctgctggaccttacactgaca gaattagattaatggacaaccctgaaaataagaaaatatgtcagccaagctcaggggtacatattgtattgcctgattat tatagtccagagagaatgggtctgttagatccctccactagtgatggccgagtcattttcttcctcccatggcaaaaaca tactcttgcaggtaccacagatacaccgtgtgaaatctctgattatccatcaccgactgagaaagaaatccagtttatac ttaatgaagtaaaaaattatcttaatccagatgtagaagtacgtagaggtgatgtattgtcggcatggtgtggcattcgt ccgttagtcagtgatcccaataaggagaatacccaatccatagcacgtaatcacattatagaagtgtcccatgataatct tatcactattgcaggtggtaagtggacgacatatcgtcacatggcagaggaaaccatagataaagctgtacagatctgtg gtctaaagcccaagtcagcgtgccgcaccaagggacttctcctggacggagctcatggctggacacctacgctgttcatc agacttgtacaggactttggtctggaaaatgaggtggctcagcatctagcagccacatatggagacaaatcctttaaagt ggcaaaaatggcagcaatgaccggcaagaggtggccagtggtgggaaaaaggctccatgaagaatttccttatttagagg ctgaggtgcggtttgcagtacgggagtatgcgtgtacggcaatagatgttttagcaaggaggacaagactggcgttttgt aatgctaatgctgcagcagaagccttgcctcgtgttgtggaaataatggctgaagaactcaagtggagtaaagcacgcaa acaggaagagattgagaaaacccagaattttttgcgtcgcgagatgggtttagaacttggtagtggagcagcaaatatac caatcaacttcactaaagatgaaattaacacctacgtcaagaaattcaacaccttggattacaacaagaagggttatatt acagtcaatgatctcagaacatattttaagaaaactggagaacgagtgacagaggatcagttacatgatatattaaatga agtagatctgaacagaaacgctcaagttgatcttggagaattcttacagttaatgtactatactcacattgctacacaag tcaacatgactacagaggaggggagatatgaccacaatctgcagaaaaagcataatatgctaatgagtgctctaaagagt ggatctgtttcaaattcacggtttgctcgtgccattgatatgtcatcagatcgggacagaatacccgtagacagaagtgg gggaggagtgtga |
|
Protein
| Protein ID | pfu_aug2.0_302.1_07326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_302.1_07326.t1 MRNFGVFLKRLAKAGAVVGVGGCVVGYVTIKYLQVPPSRPVLADEDNKYAWAPLPSRQQLWNSLEKEEFDVLVVGGGATG CGVAFDAVSRGLKTALVEKFDYGAGTSSRSTKLIHGGVRYLEKAVFNLDIEQYRMVKEALSERANLIQIAPHLAYPFPIM LPIYKLWQVPYFWAGIKSYDLVAGKQLLHRSFYLSKKKALEKFPMLKKDALVGALVYYDGQHDDARMNIAIAMSAIRMGG SLLNYTEVVEIHKSKDSTGKDVVSGAKIRDRITGKEVDVKAKCVVNAAGPYTDRIRLMDNPENKKICQPSSGVHIVLPDY YSPERMGLLDPSTSDGRVIFFLPWQKHTLAGTTDTPCEISDYPSPTEKEIQFILNEVKNYLNPDVEVRRGDVLSAWCGIR PLVSDPNKENTQSIARNHIIEVSHDNLITIAGGKWTTYRHMAEETIDKAVQICGLKPKSACRTKGLLLDGAHGWTPTLFI RLVQDFGLENEVAQHLAATYGDKSFKVAKMAAMTGKRWPVVGKRLHEEFPYLEAEVRFAVREYACTAIDVLARRTRLAFC NANAAAEALPRVVEIMAEELKWSKARKQEEIEKTQNFLRREMGLELGSGAANIPINFTKDEINTYVKKFNTLDYNKKGYI TVNDLRTYFKKTGERVTEDQLHDILNEVDLNRNAQVDLGEFLQLMYYTHIATQVNMTTEEGRYDHNLQKKHNMLMSALKS GSVSNSRFARAIDMSSDRDRIPVDRSGGGV |
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