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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_302.1_07329
Locus scaffold302.1 : 288297 ... 305485 : -
To GenomeBrowser scaffold302.1:288297..305485
Genes list of scaffold scaffold302.1
Synonym pfu_aug1.0_47745.1_63304

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_302.1_07329.t1 gi|585693462|ref|XP_006821636.1| PREDICTED: TRAF-type zinc finger domain-containing protein 1-like [Saccoglossus kowalevskii] 3.0e-37
pfu_aug2.0_302.1_07329.t1 gi|524906974|ref|XP_005108630.1| PREDICTED: TRAF-type zinc finger domain-containing protein 1-like isoform X2 [Aplysia californica] 5.0e-30
pfu_aug2.0_302.1_07329.t1 gi|524906972|ref|XP_005108629.1| PREDICTED: TRAF-type zinc finger domain-containing protein 1-like isoform X1 [Aplysia californica] 6.0e-30
pfu_aug2.0_302.1_07329.t1 gi|115746664|ref|XP_789301.2| PREDICTED: TRAF-type zinc finger domain-containing protein 1 isoform X2 [Strongylocentrotus purpuratus] 1.0e-25
pfu_aug2.0_302.1_07329.t1 gi|390365475|ref|XP_003730828.1| PREDICTED: TRAF-type zinc finger domain-containing protein 1 isoform X1 [Strongylocentrotus purpuratus] 1.0e-25

Transcript
Transcript IDpfu_aug2.0_302.1_07329.t1
Definition-
>pfu_aug2.0_302.1_07329.t1
atggcagaatcagaggaaggtgatacaaagctgtgtggtaactgtattcccctctcccctataaaatcatgtcccgaaaa
gcaggaggaactatgtcctaagcgaccagtgaagtgtactttttgtgaaatggacgtagctcattcggaattagaagcgc
accatgattactgtggaacaaggacagaggcttgccctaaatgtggacagtttataatggtgaaggatttagtaaagcat
gaagatagcaattgtacatacccaactcccaaaccgaccaatcagaatccagcatcttcaaatttgaccaatggtaacag
tactggtgcaagtagctttacagagcctgatgatttgctgtttggaggaggggagatgaatatgtttgctttcgaggaaa
tgaaaagaattttgaatgccactgagggtccgggggcttctgggttaacagttagtgatggaatgggtcagaggaagaaa
ccctcaggatcagtaatgagagcaagggggcatgctactgatgcatcgaaaaacacaggaaggttatcaaaggacaaaaa
taaggctaatcagaaatcagatctgaacagactaagagagagagccagtatcacctcaacttcaacgtcaaatagtgagg
aacaagaccgccttcttgccatgcatcttgctcacgatctcggagaatcagacgacatcgaccatctcataagaaacttt
gataagccacggaattttgacattcccgatgattattctggccacttggtagatactgatcaagattcagatttaaccat
gctgccatgtgagttttgtggggaggttataccaagcaaccagttagtcatgcatcagagccactgtacagaggaccctt
tcagttctctgatgccacatgcagcatccacagccagtagtaatattccgccacacatagacgataacagatatagccgg
ctatcccagaattccagaccaagtgctgctccgcatatgatcgacaatctacgaaatgtggcacctgctgaatggtcacc
agaggaatgggaagcgtcaggtgatgacatcatgttaccatgtgaattctgtgatgacctttaccctcaagacatgcttg
tccaacatcaggctgtatgtgaccgtaatactatgatgacacctagagttatgtccccagctgtaacacgttcttcagcc
accaggcggcctcccagaccaaatgtgccgtcagcaaagtccaggcggcagcaacccagtgtggacataggggctattct
gtccagtaacgctagcagtaaagtgggagcatcaaatgctacaaaagggacacattcatacgaacttgattcaacgctcc
gtaaatatgggagcggatcatttgacccttacactgaaagacataacagaagaatggtcagagatggaacattcaatatg
gatgatgaacctgaaaatcgttctccgaggcaatctgtcgtaaaaaagtcgaatccacggactaaaagtgccgcaaaaac
gagagaaactcttgatagattactgcatgatgataattttcaactgtcgtcaccgaccaataattttatggagcatttgc
cgtcaagtggtgcaagcaaaaggtcgagcccggacaaatccaggtcaaaaccaactggtatgcctaaatccccgtcaaaa
tcatctagtctttcaataggtggagtttcaaacattcgtacatcaacaaatgcacgtaacgtacaacgagaattgttaac
cggtgatcaaaatgatgggttatattcccctagtgtctcaggaacagtcaactcaagaaaatcttccagaggaacactag
aggatatccctgacatgaactgcaaattttgtagaatattgatattggaatattgctga

Protein
Protein IDpfu_aug2.0_302.1_07329.t1
Definition-
>pfu_aug2.0_302.1_07329.t1
MAESEEGDTKLCGNCIPLSPIKSCPEKQEELCPKRPVKCTFCEMDVAHSELEAHHDYCGTRTEACPKCGQFIMVKDLVKH
EDSNCTYPTPKPTNQNPASSNLTNGNSTGASSFTEPDDLLFGGGEMNMFAFEEMKRILNATEGPGASGLTVSDGMGQRKK
PSGSVMRARGHATDASKNTGRLSKDKNKANQKSDLNRLRERASITSTSTSNSEEQDRLLAMHLAHDLGESDDIDHLIRNF
DKPRNFDIPDDYSGHLVDTDQDSDLTMLPCEFCGEVIPSNQLVMHQSHCTEDPFSSLMPHAASTASSNIPPHIDDNRYSR
LSQNSRPSAAPHMIDNLRNVAPAEWSPEEWEASGDDIMLPCEFCDDLYPQDMLVQHQAVCDRNTMMTPRVMSPAVTRSSA
TRRPPRPNVPSAKSRRQQPSVDIGAILSSNASSKVGASNATKGTHSYELDSTLRKYGSGSFDPYTERHNRRMVRDGTFNM
DDEPENRSPRQSVVKKSNPRTKSAAKTRETLDRLLHDDNFQLSSPTNNFMEHLPSSGASKRSSPDKSRSKPTGMPKSPSK
SSSLSIGGVSNIRTSTNARNVQRELLTGDQNDGLYSPSVSGTVNSRKSSRGTLEDIPDMNCKFCRILILEYC

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