Gene
| Gene Model ID | pfu_aug2.0_303.1_10579 |
|---|---|
| Locus | scaffold303.1 : 1 ... 11051 : + |
| To GenomeBrowser | scaffold303.1:1..11051 |
| Genes list of scaffold | scaffold303.1 |
| Synonym | pfu_aug1.0_6215.1_45389 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_303.1_10579.t1 | 1 | 1 | PIH1 | 26 | 92 | 5.3e-12 | 45.8 | 3.7e-16 | 5.5e-12 | 45.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_303.1_10579.t1 | gi|390370930|ref|XP_003731928.1| | PREDICTED: protein PIH1D3 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_303.1_10579.t1 | gi|390336379|ref|XP_003724337.1| | 0.0 | |
| pfu_aug2.0_303.1_10579.t1 | gi|115670823|ref|XP_001197112.1| | PREDICTED: protein PIH1D3 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_303.1_10579.t1 | gi|524912477|ref|XP_005111086.1| | PREDICTED: protein PIH1D3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_303.1_10579.t1 | gi|676459441|ref|XP_009055301.1| | hypothetical protein LOTGIDRAFT_182066 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_303.1_10579.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10579.t1 gtatgagatattattcaagcagtccgtgacgtcagaggatatgtttctacagatgggtaacaagacaccagccacatcga gttgtgaagacatggtggttaaagtaatgttaccggggaccagggcagctgatatgactgttgatgtgaagaagaaattt ttagatctcagaactcctaaatataaacttggtttacatttgccacaccctgtagatgataagagtggtaaagctcagtg ggacaataagaaagaaacattaagtgtgacgctacgaatgatgcgggaatacgacttgttcaatttctga |
|
Protein
| Protein ID | pfu_aug2.0_303.1_10579.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10579.t1 YEILFKQSVTSEDMFLQMGNKTPATSSCEDMVVKVMLPGTRAADMTVDVKKKFLDLRTPKYKLGLHLPHPVDDKSGKAQW DNKKETLSVTLRMMREYDLFNF |
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