Gene
| Gene Model ID | pfu_aug2.0_303.1_10584 |
|---|---|
| Locus | scaffold303.1 : 151518 ... 153885 : - |
| To GenomeBrowser | scaffold303.1:151518..153885 |
| Genes list of scaffold | scaffold303.1 |
| Synonym | pfu_aug1.0_199602.1_35775 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_303.1_10584.t2 | 2 | 1 | F5_F8_type_C | 33 | 141 | 7.2e-07 | 29.0 | 3.0e-10 | 1.5e-06 | 28.0 |
| pfu_aug2.0_303.1_10584.t2 | 2 | 2 | F5_F8_type_C | 184 | 184 | 7.2e-07 | 29.0 | 0.46 | 2300.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_303.1_10584.t2 | gi|498981333|ref|XP_004529581.1| | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_303.1_10584.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10584.t1 atgctttcccttcccgggtcatcgtcttacttgttaagggactggaaagttgatacaaggattctaacgaaggcggatcc cacacctctttcgttggagaatagagagtacgtgatacatatgagttctataaacgtgaatctactacatactcacacct tctccgttgacttgtctatggacggaaacactgaccagaatgtctttggcatatcctgttccgagacgttatatgatacc aatccttactggtttgtcaacttcactgagcctgtacaagtttatggagtcaatatttgggtccggaatgattgctgtca ctaccgttttcataatgtgacaattaaagtgggaagtgaaatggacgacatttggccaaatttggtagatggtcagttat gtcattggttcccgggagcggcgtcacacattgacaacgcctttaacttcacgtgtacctcaactccactgactggacat tatgttgttatccaggtccatgacgacactgatcataacggcattctgtccctctgtgaagtccagatcattgctgactc cccacaagaagaaaccaccaccacatattctccaacatcaacggaaagatccactgaaatgacatcatctttaccaccgt ctacgagcgcactgaagtattccactgattggacaacgcttttttacacgaaaacgtcgacaagtgataccaattgtatg tgttattgtccgacaagctcaaagaatacatctgatatacaacaaaaactggacaacatcaagaaagatctgacactcaa taagaaagtgttaaattcctataacaggagactgatatccgccgatgaccagcggacattttccaaggcggcgggattcg tggcagtgtgcgtattatgtacagtggtaggactaatcattgcctgtgacatcacgaacgtggtcaaagacacgaaaaag gtttacactgttaaacataagtga |
|
| Transcript ID | pfu_aug2.0_303.1_10584.t2 |
| Definition | - |
>pfu_aug2.0_303.1_10584.t2 atgagttctataaacgtgaatctactacatactcacaccttctccgttgacttgtctatggacggaaacactgaccagaa tgtctttggcatatcctgttccgagacgttatatgataccaatccttactggtttgtcaacttcactgagcctgtacaag tttatggagtcaatatttgggtccggaatgattgctgtcactaccgttttcataatgtgacaattaaagtgggaagtgaa atggacgacatttggccaaatttggtagatggtcagttatgtcattggttcccgggagcggcgtcacacattgacaacgc ctttaacttcacgtgtacctcaactccactgactggacattatgttgttatccaggtccatgacgacactgatcataacg gcattctgtccctctgtgaagtccagatcattgctgactccccacaagaagaaaccaccaccacatattctccaacatca acggaaagatccactgaaatgacatcatctttaccaccgtctacgagcgcactgaagtattccactgattggacaacgct tttttacacgaaaacgtcgacaagtgataccaattgtatgtgttattgtccgacaagctcaaagaatacatctgatatac aacaaaaactggacaacatcaagaaagatctgacactcaataagaaagtgttaaattcctataacaggagactgatatcc gccgatgaccagcggacattttccaaggcggcgggattcgtggcagtgtgcgtattatgtacagtggtaggactaatcat tgcctgtgacatcacgaacgtggtcaaagacacgaaaaaggtttacactgttaaacataagtga |
|
Protein
| Protein ID | pfu_aug2.0_303.1_10584.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10584.t1 MLSLPGSSSYLLRDWKVDTRILTKADPTPLSLENREYVIHMSSINVNLLHTHTFSVDLSMDGNTDQNVFGISCSETLYDT NPYWFVNFTEPVQVYGVNIWVRNDCCHYRFHNVTIKVGSEMDDIWPNLVDGQLCHWFPGAASHIDNAFNFTCTSTPLTGH YVVIQVHDDTDHNGILSLCEVQIIADSPQEETTTTYSPTSTERSTEMTSSLPPSTSALKYSTDWTTLFYTKTSTSDTNCM CYCPTSSKNTSDIQQKLDNIKKDLTLNKKVLNSYNRRLISADDQRTFSKAAGFVAVCVLCTVVGLIIACDITNVVKDTKK VYTVKHK |
|
| Protein ID | pfu_aug2.0_303.1_10584.t2 |
| Definition | - |
>pfu_aug2.0_303.1_10584.t2 MSSINVNLLHTHTFSVDLSMDGNTDQNVFGISCSETLYDTNPYWFVNFTEPVQVYGVNIWVRNDCCHYRFHNVTIKVGSE MDDIWPNLVDGQLCHWFPGAASHIDNAFNFTCTSTPLTGHYVVIQVHDDTDHNGILSLCEVQIIADSPQEETTTTYSPTS TERSTEMTSSLPPSTSALKYSTDWTTLFYTKTSTSDTNCMCYCPTSSKNTSDIQQKLDNIKKDLTLNKKVLNSYNRRLIS ADDQRTFSKAAGFVAVCVLCTVVGLIIACDITNVVKDTKKVYTVKHK |
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