Gene
| Gene Model ID | pfu_aug2.0_303.1_10585 |
|---|---|
| Locus | scaffold303.1 : 163295 ... 175002 : + |
| To GenomeBrowser | scaffold303.1:163295..175002 |
| Genes list of scaffold | scaffold303.1 |
| Synonym | pfu_aug1.0_27905.1_55227 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_303.1_10585.t1 | 1 | 1 | DDE_3 | 30 | 94 | 1.5e-06 | 27.9 | 3.5e-10 | 2.6e-06 | 27.2 |
| pfu_aug2.0_303.1_10585.t1 | 4 | 1 | CBM_14 | 132 | 173 | 6.4e-12 | 45.2 | 2.9e-08 | 0.00022 | 21.1 |
| pfu_aug2.0_303.1_10585.t1 | 4 | 2 | CBM_14 | 178 | 222 | 6.4e-12 | 45.2 | 1.9e-09 | 1.4e-05 | 24.9 |
| pfu_aug2.0_303.1_10585.t1 | 4 | 3 | CBM_14 | 262 | 283 | 6.4e-12 | 45.2 | 5.6e-05 | 0.42 | 10.5 |
| pfu_aug2.0_303.1_10585.t1 | 4 | 4 | CBM_14 | 470 | 481 | 6.4e-12 | 45.2 | 0.38 | 2800.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_303.1_10585.t1 | gi|676446256|ref|XP_009051020.1| | hypothetical protein LOTGIDRAFT_231395 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_303.1_10585.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10585.t1 atgagtatacatgacaaaggacgaaacgggaaaagggaggctcgtgtttccgtgaacactagttacgggaaaatattaaa cttaagcgccgcggaaggctcactgttgttccatcaagacaatcctcctgttcacaagtctgtcactgccatagctgcca ttcatgattgtggctttaatttgattgagtatccgccttattcacctgatcttgctccatcagactttcatctattccca aaactgaaagcagctatttctggcaaccactttcagtccgacgacgtcatacttgcagtggatggctttctgaccagtca agataaggcgtactttaaaagtggtcccaagcattgtaaggcagctctggtgtatggagggtgggcctacagccgtatga aggggtcctgtaaccaattcatacagtgtacggaacgagaccaagcattcattcaaacatgcgcagctggtacattctac aacgggaaggaatgtcgacatgcaagagaagtcaactgtccatatgatccttgttctgtacagaagaagggattcaagta ctcggacggtcagagttgttttggatactatagatgtgtccaaggtcgatctttctacaagacgtgtaagaatggttact atttcaatccctacaaacaaggatgttacggagacccaacttgtaaaagagacaacctcatccatccatgcgcctttggg acaacttacccgtttccagggaaacctcggttgttttacttgtttgatggtcttgagacctttacaccaatgcggtgtcc tcgcgggacgtggtatcgccatgacatttgtacatgtgactggatcactccgggaaaaatcaaggacagtgtctgtagca cgatgtttcatttcatgtacgatggaaacttcctggaaaagtacaacaggatccagcaaatgccgacaacgggcgtcgcc atctttgggaaatcggccctcttcaacaagggcgggaaaataatcatctgggcgatgaataaccttgaccttgacaatga ctttgccctctgctttgaatttcaagtcaagacgatgaatggagaagtctcattactatcaaatgactatgataaagtgt cattcacatataaactgacctacataccgctcaaacgtaaagtccgcgcttacgtcattctcaaagacggtacactggcg gatctcaccgttattggagtggatccaaacaaacctcattttgtacggctggccaagtttggagacgacattaaactacg tgtagacaatacgcctgccgctgtggtaaaagcacatgccggtgtagcaccaaacaagagtcccctggtgatcggagctg caagaggctctcatgattttattggatattttgatgagctgaagttctttagatgtgttccatctcacttctttgatgat taccatgacgacgagaggaaataa |
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Protein
| Protein ID | pfu_aug2.0_303.1_10585.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10585.t1 MSIHDKGRNGKREARVSVNTSYGKILNLSAAEGSLLFHQDNPPVHKSVTAIAAIHDCGFNLIEYPPYSPDLAPSDFHLFP KLKAAISGNHFQSDDVILAVDGFLTSQDKAYFKSGPKHCKAALVYGGWAYSRMKGSCNQFIQCTERDQAFIQTCAAGTFY NGKECRHAREVNCPYDPCSVQKKGFKYSDGQSCFGYYRCVQGRSFYKTCKNGYYFNPYKQGCYGDPTCKRDNLIHPCAFG TTYPFPGKPRLFYLFDGLETFTPMRCPRGTWYRHDICTCDWITPGKIKDSVCSTMFHFMYDGNFLEKYNRIQQMPTTGVA IFGKSALFNKGGKIIIWAMNNLDLDNDFALCFEFQVKTMNGEVSLLSNDYDKVSFTYKLTYIPLKRKVRAYVILKDGTLA DLTVIGVDPNKPHFVRLAKFGDDIKLRVDNTPAAVVKAHAGVAPNKSPLVIGAARGSHDFIGYFDELKFFRCVPSHFFDD YHDDERK |
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