Gene
| Gene Model ID | pfu_aug2.0_303.1_10589 |
|---|---|
| Locus | scaffold303.1 : 207245 ... 217542 : + |
| To GenomeBrowser | scaffold303.1:207245..217542 |
| Genes list of scaffold | scaffold303.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_303.1_10589.t1 | 2 | 1 | BAR | 22 | 86 | 1.0e-10 | 41.5 | 4.0e-05 | 0.099 | 12.1 |
| pfu_aug2.0_303.1_10589.t1 | 2 | 2 | BAR | 98 | 172 | 1.0e-10 | 41.5 | 1.6e-11 | 3.9e-08 | 33.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_303.1_10589.t1 | gi|676471107|ref|XP_009059072.1| | hypothetical protein LOTGIDRAFT_192130 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_303.1_10589.t1 | gi|524871188|ref|XP_005092370.1| | PREDICTED: bridging integrator 3-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_303.1_10589.t1 | gi|260817940|ref|XP_002603843.1| | hypothetical protein BRAFLDRAFT_285391 [Branchiostoma floridae] | 2.0e-39 |
| pfu_aug2.0_303.1_10589.t1 | gi|543739984|ref|XP_005510886.1| | PREDICTED: bridging integrator 3 [Columba livia] | 3.0e-33 |
| pfu_aug2.0_303.1_10589.t1 | gi|705676645|ref|XP_010117083.1| | PREDICTED: LOW QUALITY PROTEIN: bridging integrator 3, partial [Chlamydotis macqueenii] | 3.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_303.1_10589.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10589.t1 atgaggtacaagaatccattcagccgtcattctgccccaaagaaaagtgtagtatctagagctactgaaagggacataga gagagaagtgaagaaaattgagagattggaggagacaagcaagaaactgtacaaagacacaaagagatggattgaatcaa acaatgcgctgtgtaacagtgaacataagataacacaggacttactgagcagtcagctttgtcagacggagccagaatta aggaccgctataacagactgggaccaagcagtggaaaaacaggaacagtacatgaaggagcttgagtacatgaaatgcca agctcgacttgagaagcatcaagacaaagaacgtacaggacagaatgtggttaaactcgatactagtaggaaggcactta acaagtccaaagaagattttgagaaccaaaaccaagccctagtagaggacttaccaaagtttgtagataacagaatagaa tacttccagccttgtatggactcattaattaaatcggagcctaaagggcagttttggaaggagcttgaacaatcttcata a |
|
Protein
| Protein ID | pfu_aug2.0_303.1_10589.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10589.t1 MRYKNPFSRHSAPKKSVVSRATERDIEREVKKIERLEETSKKLYKDTKRWIESNNALCNSEHKITQDLLSSQLCQTEPEL RTAITDWDQAVEKQEQYMKELEYMKCQARLEKHQDKERTGQNVVKLDTSRKALNKSKEDFENQNQALVEDLPKFVDNRIE YFQPCMDSLIKSEPKGQFWKELEQSS |
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