Gene
| Gene Model ID | pfu_aug2.0_303.1_10591 |
|---|---|
| Locus | scaffold303.1 : 271217 ... 291524 : - |
| To GenomeBrowser | scaffold303.1:271217..291524 |
| Genes list of scaffold | scaffold303.1 |
| Synonym | pfu_aug1.0_28088.1_26405 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_303.1_10591.t2 | 2 | 1 | Reprolysin_4 | 265 | 285 | 7.9e-09 | 35.3 | 0.39 | 1400.0 | -1.5 |
| pfu_aug2.0_303.1_10591.t2 | 2 | 1 | Reprolysin_5 | 452 | 609 | 6.8e-11 | 42.4 | 1.8e-14 | 6.8e-11 | 42.4 |
| pfu_aug2.0_303.1_10591.t2 | 3 | 1 | Reprolysin_2 | 455 | 636 | 1.0e-10 | 41.9 | 2.7e-14 | 1.0e-10 | 41.9 |
| pfu_aug2.0_303.1_10591.t2 | 1 | 1 | Reprolysin | 496 | 651 | 3.4e-15 | 56.1 | 1.7e-18 | 6.3e-15 | 55.2 |
| pfu_aug2.0_303.1_10591.t2 | 2 | 2 | Reprolysin_4 | 512 | 601 | 7.9e-09 | 35.3 | 3.4e-12 | 1.3e-08 | 34.6 |
| pfu_aug2.0_303.1_10591.t2 | 3 | 2 | Reprolysin_2 | 712 | 756 | 1.0e-10 | 41.9 | 0.85 | 3100.0 | -2.0 |
| pfu_aug2.0_303.1_10591.t2 | 2 | 2 | Reprolysin_5 | 784 | 784 | 6.8e-11 | 42.4 | 4.0 | 15000.0 | -10.5 |
| pfu_aug2.0_303.1_10591.t2 | 3 | 3 | Reprolysin_2 | 815 | 825 | 1.0e-10 | 41.9 | 4.0 | 15000.0 | -6.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_303.1_10591.t2 | gi|676462352|ref|XP_009056241.1| | hypothetical protein LOTGIDRAFT_162054 [Lottia gigantea] | 4.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_303.1_10591.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10591.t1 atggacggaaaccaagaaatcgtcccaatagagctaatactagatgataagccgcttgagttcataaggaatcggcggtc agtgtcggactttgaccactttccacaaactctttctttcaaatttcaaacgagtttcggagaggtgaagctcgacttac aaagaaatgatctcataaccatccctccagtctacctgtggaatggacaacaagtcgtcaaaaatggagaactcaaaatg cagcgtgattttgcggtttaccaaggtgacgatatgggggccagtgccttggtcacgtttccatccaatgattatacgca gtttgaattgcatgccagctacatgaataatggccaatggttttctatagaacctttgaaaccttccagaaataaacgat cagtgccaattcagaaaccggtgtttcccactttcccgccaacaactcagcatccggcggccatcttgagatcacatctt atacagaagctaatggaagacctagatttcggagatgactatgttattattagtatgtga |
|
| Transcript ID | pfu_aug2.0_303.1_10591.t2 |
| Definition | - |
>pfu_aug2.0_303.1_10591.t2 atggacggaaaccaagaaatcgtcccaatagagctaatactagatgataagccgcttgagttcataaggaatcggcggtc agtgtcggactttgaccactttccacaaactctttctttcaaatttcaaacgagtttcggagaggtgaagctcgacttac aaagaaatgatctcataaccatccctccagtctacctgtggaatggacaacaagtcgtcaaaaatggagaactcaaaatg cagcgtgattttgcggtttaccaaggtgacgatatgggggccagtgccttggtcacgtttccatccaatgattatacgca gtttgaattgcatgccagctacatgaataatggccaatggttttctatagaacctttgaaaccttccagaaataaacgat cagtgccaattcagaaaccggtgtttcccactttcccgccaacaactcagcatccggcggccatcttgagatcacatctt atacagaagctaatggaagacctagatttcggagatgactatgttattattataaacgaaactgtaaaagttggcgattt gaaggttattgtgagatctatagtacaagaattaatgaaagatgccagggaagaattttcgaaaaggataagtgacctgg aagaagtacatagaaaaaaggaaggttacttacaagaccagatagacgggttaacgcatgataaagaaatattggcagaa aaattagctgatagagagaaagatttacgagaaataaaaaaggtgatgaatgaaacatcgattatcgcacatgaagcttt ggtacagtcaaacagaaatgaacaatatagcagaaagtataacatcaaaatctacggtatggccgagcaaccagccgagg acacagagtcaaaggtcactaccatgttacgagatgtagctaatgttgctttaaataaggaggagatcatcgcagtgcat cgcattccgaccggtaaacacgatggcccacgtccgattttgctaaaagtggtcaatagtaacgtgaaggctagaataat gaaacagagatcagtcgtgaaacgcatcgccgcccccctccgattcgcagatgatgtgacgcacagaaactcggggctca ttcaacgtttaagtcaacacgatgatattgaacaatcttattactttaatggcagtgtctatggcaaaatcgtaggcagc gatagacgtatgaagtttgatattggtgatgatattgagtctaaaattaaaaaaggacagaggcgcacaggaccaaatgg atcgcagcagtcctaatggcaaagtatgatgtcggggtctacagaccaagaaatacaagatcaagccacggctgccatta caaaatattatctttaccttgttaacggaatggacactcgctttaagaccgcacttacaacacaaggggatctacgtgtc ggtatagcaggattagttttagcaatggaccccgattcctcaggatggacagaggacaacgtgatcacgggtaacctggt gaatgacgggaatacgctcctgaacttcgcccagtgggtcaactctcagagtggtacactccctacacacgatcacgccg cactctttactggatataatctagcagaatcagcgtcaaatagcagaacaatagggatatcctacttgtctcgggtgtgt aacacatacgcctcctccgtcaacgaggaattattcaacgccatatccattcatatcgctgcgcacgagttgggtcacag tgtcggagcatcacatgattcgtcaagctcatgtccatcaagtatggtgtatctaatggcgggaactctacctaaccctg ccaatcttagcccctccctcgctcagaatacatacatgttctcatcttgttctcgctcagccattggccagtacatcgcc ggattgtccacgaactgcctgagcaatgaaccgccctacctgaatgtattagatggatcatcacagacaccatactacgt ggacgaacagtgtcagctgacgtacgctccgtctactgatacgtcattctgcagggaaagttacgtaggtactcagttaa aatggatggtgccaacaaggcgcatgcgtgagttcactggatgcccaggatgttccagcgactacaacagcaaagacgac gacaacaacacccacgacgactacgacacaaacgccaacagcgacaacacccacgacgactacaacacccacaacgacta cgacacccactacatctacaacgacaaccacacccatatcgactactacaccaacagcgactacaacaccaacagcgact acaacatcaatgacttcaacaccagcaacgactacgataaccacaacgactacaatgccgacggcgactacaacacccac aacgactacaacacccataacgactacagcaccaactacgactacagcaacgactacgacaccaacggtgaactcaacaa cagcaacgactacaacaccaacgaccattactacaccaacaacgactacatctcaaacaacttcttcatcgattccgata acaactccagtatcatcaacaatttcctcaacagagacacagacgatatcatcgtcaccagaggaatcattttcttcaat atcgactgttgctatgactacctcgctgtctatattaccaacttttgtaaatga |
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Protein
| Protein ID | pfu_aug2.0_303.1_10591.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10591.t1 MDGNQEIVPIELILDDKPLEFIRNRRSVSDFDHFPQTLSFKFQTSFGEVKLDLQRNDLITIPPVYLWNGQQVVKNGELKM QRDFAVYQGDDMGASALVTFPSNDYTQFELHASYMNNGQWFSIEPLKPSRNKRSVPIQKPVFPTFPPTTQHPAAILRSHL IQKLMEDLDFGDDYVIISM |
|
| Protein ID | pfu_aug2.0_303.1_10591.t2 |
| Definition | - |
>pfu_aug2.0_303.1_10591.t2 MDGNQEIVPIELILDDKPLEFIRNRRSVSDFDHFPQTLSFKFQTSFGEVKLDLQRNDLITIPPVYLWNGQQVVKNGELKM QRDFAVYQGDDMGASALVTFPSNDYTQFELHASYMNNGQWFSIEPLKPSRNKRSVPIQKPVFPTFPPTTQHPAAILRSHL IQKLMEDLDFGDDYVIIINETVKVGDLKVIVRSIVQELMKDAREEFSKRISDLEEVHRKKEGYLQDQIDGLTHDKEILAE KLADREKDLREIKKVMNETSIIAHEALVQSNRNEQYSRKYNIKIYGMAEQPAEDTESKVTTMLRDVANVALNKEEIIAVH RIPTGKHDGPRPILLKVVNSNVKARIMKQRSVVKRIAAPLRFADDVTHRNSGLIQRLSQHDDIEQSYYFNGSVYGKIVGS DRRMKFDIGDDIESKIKKGQRRTGPNGSQQSXWQSMMSGSTDQEIQDQATAAITKYYLYLVNGMDTRFKTALTTQGDLRV GIAGLVLAMDPDSSGWTEDNVITGNLVNDGNTLLNFAQWVNSQSGTLPTHDHAALFTGYNLAESASNSRTIGISYLSRVC NTYASSVNEELFNAISIHIAAHELGHSVGASHDSSSSCPSSMVYLMAGTLPNPANLSPSLAQNTYMFSSCSRSAIGQYIA GLSTNCLSNEPPYLNVLDGSSQTPYYVDEQCQLTYAPSTDTSFCRESYVGTQLKWMVPTRRMREFTGCPGCSSDYNSKDD DNNTHDDYDTNANSDNTHDDYNTHNDYDTHYIYNDNHTHIDYYTNSDYNTNSDYNINDFNTSNDYDNHNDYNADGDYNTH NDYNTHNDYSTNYDYSNDYDTNGELNNSNDYNTNDHYYTNNDYISNNFFIDSDNNSSIINNFLNRDTDDIIVTRGIIFFN IDCCYDYLAVYITNFCK |
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