Gene
| Gene Model ID | pfu_aug2.0_303.1_10592 |
|---|---|
| Locus | scaffold303.1 : 291596 ... 293184 : - |
| To GenomeBrowser | scaffold303.1:291596..293184 |
| Genes list of scaffold | scaffold303.1 |
| Synonym | pfu_aug1.0_121554.1_57108 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 5-hydroxytryptamine receptor 1b-like | GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_303.1_10592.t1 | 1 | 1 | 7tm_1 | 50 | 362 | 4.7e-33 | 114.4 | 1.3e-36 | 6.2e-33 | 114.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_303.1_10592.t1 | gi|241854059|ref|XP_002415939.1| | G-protein coupled receptor, putative [Ixodes scapularis] | 1.0e-17 |
| pfu_aug2.0_303.1_10592.t1 | gi|658910307|ref|XP_008395239.1| | PREDICTED: 5-hydroxytryptamine receptor 1B-like [Poecilia reticulata] | 1.0e-17 |
| pfu_aug2.0_303.1_10592.t1 | gi|617507137|ref|XP_007541820.1| | PREDICTED: 5-hydroxytryptamine receptor 1B-like [Poecilia formosa] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_303.1_10592.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10592.t1 atggatgcaattggcgggtcaatggaaagtgttgtaaacagttcagcgcaaccggaaccggaaggaaaccatttatcaga ctttccctggattgattttgcgtttttcttcacgaccactacactgattataactctaaatggaacagttctcgtggttt tggcgaaaattggcgtcaagaaactcaaaaagagcgtccacaacgttcagatactgagtcttagtgtaagcgacatcatg gtaggcgtatcccttatacccatgcaggtgtcattttacgcgggagaaatgacgcacctgcagtgtgccgtgcgttgtgg cgtctttatggtggcgttcatggcgtcaatgttacacgtgtgcataatttgcatagacagatggtgggttatatacttta aagttacccagacaaagacgcagttcctgccccgatgtatgttactaataacctccacgtggacgctagccttcgttgta gagtttatcccccttgtactgtggagggacagtagggcgcatgtcatatgttccatcggaacgattttcggcgacttctt taatgaagcgtttgcgtatctcgcctttacgcatacttccgttctcgtttgcgtgactattttctattgtttcatcatcg ttttcattatgaaacggaggtcaaagatcaatgtcgtacaaaatgagaccatccagataagcatatcaaacaataccgga aacggaagtggatgcgctgtaaacaccacagagagtccgattccatttcgacttccgaattttttctccaatgatgggat tccagcctgcgactcaaccaaatctaccccacataataagaagaaacgcagtgttgtctcaaataccaacagctgtagat ctaccgtggtccgcaaaagtgacgcgaagcaaagacgggcactgaaaaccatcgggctgatcgtatcatttcacgtcctc tgtgttgggcctttgattatcttactttttgcggaggttatatccgatgatcgcgcttcactgacttggcaccatgccat gttctgtcttgcgtgtctgagttccgccattaacccgcttctctacgcgttcagagtaccggaaataaggaagactttac tttgtaaggatgacgtcgacaactag |
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Protein
| Protein ID | pfu_aug2.0_303.1_10592.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_303.1_10592.t1 MDAIGGSMESVVNSSAQPEPEGNHLSDFPWIDFAFFFTTTTLIITLNGTVLVVLAKIGVKKLKKSVHNVQILSLSVSDIM VGVSLIPMQVSFYAGEMTHLQCAVRCGVFMVAFMASMLHVCIICIDRWWVIYFKVTQTKTQFLPRCMLLITSTWTLAFVV EFIPLVLWRDSRAHVICSIGTIFGDFFNEAFAYLAFTHTSVLVCVTIFYCFIIVFIMKRRSKINVVQNETIQISISNNTG NGSGCAVNTTESPIPFRLPNFFSNDGIPACDSTKSTPHNKKKRSVVSNTNSCRSTVVRKSDAKQRRALKTIGLIVSFHVL CVGPLIILLFAEVISDDRASLTWHHAMFCLACLSSAINPLLYAFRVPEIRKTLLCKDDVDN |
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