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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3042.1_09047
Locus scaffold3042.1 : 716 ... 28266 : +
To GenomeBrowser scaffold3042.1:716..28266
Genes list of scaffold scaffold3042.1
Synonym pfu_aug1.0_2718.1_23059

Manual annotation
Annotation by Blast2GO
Annotation GO
structural maintenance of chromosomes protein 6-like GO:0000724 GO:0005524 GO:0030915 GO:0051276

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_3042.1_09047.t1 gi|524911742|ref|XP_005110731.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Aplysia californica] 2.0e-25
pfu_aug2.0_3042.1_09047.t1 gi|676430685|ref|XP_009046007.1| hypothetical protein LOTGIDRAFT_137540, partial [Lottia gigantea] 6.0e-20
pfu_aug2.0_3042.1_09047.t1 gi|260787331|ref|XP_002588707.1| hypothetical protein BRAFLDRAFT_131216 [Branchiostoma floridae] 5.0e-17
pfu_aug2.0_3042.1_09047.t1 gi|156376571|ref|XP_001630433.1| predicted protein [Nematostella vectensis] 2.0e-16
pfu_aug2.0_3042.1_09047.t1 gi|564258666|ref|XP_006268265.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Alligator mississippiensis] 3.0e-14

Transcript
Transcript IDpfu_aug2.0_3042.1_09047.t1
Definition-
>pfu_aug2.0_3042.1_09047.t1
atgtctaaacgaaagcatccagaagatgaagatgtggatgatgattccatggatttgtcccaagcagaacttggcaatga
aaaggtggacaatcccgtctctattctaaatcaggatactagcagaaatttcctcaactctaaaagttccaatgataaat
acaagtttttcctcaaagctacgcagttggaacagatgaaattggattacagcagggcaaatgaacagaaagaagttact
aaagtgatgatagaaaagaaaaaagaggcaaaagtagatgattgtgtaaaacgacataaagcaattcaagaggagttgaa
gagaacaagtgaagaagtgaatgtactgagacctcagtttgatgaagccaagaaagacttgaatgaaaagaagaaaaatg
ctcgtaatgctcagattgagagtcgtaaaattgaaaatcagttgaggaaattgactcaggaaagagaggacataaaagca
aagatcaaagacctacagaaaacagctcagaccgactttaattcggagaaaaagaaacgagaggcaaatatacggtccct
tgaacaattcatggaggcaaatgaagcccagaaacaaacaactgaacatgatatggagaaattcagaggggctgtaacaa
aactgaaaaatgatgaatacagactgaaagcctccgaagcagagaagagaaaaccaagaagcaactga

Protein
Protein IDpfu_aug2.0_3042.1_09047.t1
Definition-
>pfu_aug2.0_3042.1_09047.t1
MSKRKHPEDEDVDDDSMDLSQAELGNEKVDNPVSILNQDTSRNFLNSKSSNDKYKFFLKATQLEQMKLDYSRANEQKEVT
KVMIEKKKEAKVDDCVKRHKAIQEELKRTSEEVNVLRPQFDEAKKDLNEKKKNARNAQIESRKIENQLRKLTQEREDIKA
KIKDLQKTAQTDFNSEKKKREANIRSLEQFMEANEAQKQTTEHDMEKFRGAVTKLKNDEYRLKASEAEKRKPRSN

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