Gene
| Gene Model ID | pfu_aug2.0_3045.1_19009 |
|---|---|
| Locus | scaffold3045.1 : 1 ... 14529 : + |
| To GenomeBrowser | scaffold3045.1:1..14529 |
| Genes list of scaffold | scaffold3045.1 |
| Synonym | pfu_aug1.0_16022.1_68922 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3045.1_19009.t1 | 2 | 1 | SPG48 | 159 | 381 | 0.0 | 308.0 | 0.0 | 0.0 | 233.0 |
| pfu_aug2.0_3045.1_19009.t1 | 2 | 2 | SPG48 | 383 | 471 | 0.0 | 308.0 | 2.1e-25 | 1.6e-21 | 76.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3045.1_19009.t1 | gi|557019916|ref|XP_006010298.1| | PREDICTED: AP-5 complex subunit zeta-1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_3045.1_19009.t1 | gi|260801753|ref|XP_002595760.1| | hypothetical protein BRAFLDRAFT_117560 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_3045.1_19009.t1 | gi|632970471|ref|XP_007901670.1| | PREDICTED: AP-5 complex subunit zeta-1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_3045.1_19009.t1 | gi|573898882|ref|XP_006637173.1| | PREDICTED: AP-5 complex subunit zeta-1-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_3045.1_19009.t1 | gi|530590969|ref|XP_005289141.1| | PREDICTED: AP-5 complex subunit zeta-1 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3045.1_19009.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3045.1_19009.t1 atggatatcaaccctgaaggagggttacacagctcagagacagagtttttcatttctcttagctgtacagatattgcaca acaaattgatatcagaagagaaccttagcacggtgaacagctctgtcagtgattggttgatgaacacaagtctctatcag ctacccaacccatacacaatcaatcctttcaaaaaggatcaaaatcagttagtcaatgaaatagatggaacttctagcag aaactttttcaccgtactgaacataggtcagtactatactgatgatcagttcctgaacatttttacgttttcaatgctgt acaagtggatctatcattgctaccattgtaccgaggagacaggagatcgcacacaatcatcacgggtgtttactgtgcta ggcaataaaacagtggattattgctttagactactagaccagtgtgaaagaaagccaaaagtttcatcagatacagaaat tcagaattgttgcttacttgaaaccatcaacatcttggacattatttgtcaaattgatcccagtcatgtaccaagagtgt tccaggaggtacggaggctatatggcagattgtccacagaatcagagagagtcagacttctcctacctatactgcagttt tttgtgcaccatagtaaggcagtagtccatgatccacaggaatcatacactctatacttccacaaacttctctctcagtg gtaccaggatcctgctgtagccttcgatacagtcacctttatcaaagataacctggaagtcctctgtcatcatactaatt tactcagtaaatacttccctaacatattcaagatactagcatggaaccctcgaggattcttgtccgatttcttagatatc attccagcctgtatgaatctgtctactgctacagagattttacatttgatactggacctaccgtgtgtgactgtagctct ggagatcacagataagtgtagacgtacagagatgacggtatctgtggatacagaacctacaaactccaccgaagcattcc agaatcctatgtacagacctatgttcaacttctttacaagagtagaaggtggccatggagacactattaataggttatca gcatttcataccacattgaaagatatcttgtggttcgaggttgtatttaaagaaggttccaaagagatgtttacagaact gattcctactttactagagaggtcaggacttctctatgatatttatgagttcaaagtagatgttaaaagagttttggcgg aaaacttgttgctgctgttcagaaaacatcccagtgtattgatagaacaagctcaggaaatcagagattttgtaatgagc ccacgcaatattgaaaatcgtgtggaattctttggaaatctgatttggtgtattgttttgccactgttgtattaa |
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Protein
| Protein ID | pfu_aug2.0_3045.1_19009.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3045.1_19009.t1 WISTLKEGYTAQRQSFSFLLAVQILHNKLISEENLSTVNSSVSDWLMNTSLYQLPNPYTINPFKKDQNQLVNEIDGTSSR NFFTVLNIGQYYTDDQFLNIFTFSMLYKWIYHCYHCTEETGDRTQSSRVFTVLGNKTVDYCFRLLDQCERKPKVSSDTEI QNCCLLETINILDIICQIDPSHVPRVFQEVRRLYGRLSTESERVRLLLPILQFFVHHSKAVVHDPQESYTLYFHKLLSQW YQDPAVAFDTVTFIKDNLEVLCHHTNLLSKYFPNIFKILAWNPRGFLSDFLDIIPACMNLSTATEILHLILDLPCVTVAL EITDKCRRTEMTVSVDTEPTNSTEAFQNPMYRPMFNFFTRVEGGHGDTINRLSAFHTTLKDILWFEVVFKEGSKEMFTEL IPTLLERSGLLYDIYEFKVDVKRVLAENLLLLFRKHPSVLIEQAQEIRDFVMSPRNIENRVEFFGNLIWCIVLPLLY |
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