Gene
| Gene Model ID | pfu_aug2.0_3055.1_19016 |
|---|---|
| Locus | scaffold3055.1 : 35727 ... 72735 : - |
| To GenomeBrowser | scaffold3055.1:35727..72735 |
| Genes list of scaffold | scaffold3055.1 |
| Synonym | pfu_aug1.0_1634.1_08038 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3055.1_19016.t1 | 3 | 1 | MGC-24 | 27 | 85 | 5.6e-08 | 32.7 | 1.7 | 13000.0 | -4.3 |
| pfu_aug2.0_3055.1_19016.t1 | 3 | 2 | MGC-24 | 74 | 194 | 5.6e-08 | 32.7 | 2.0 | 15000.0 | -10.3 |
| pfu_aug2.0_3055.1_19016.t1 | 3 | 3 | MGC-24 | 204 | 393 | 5.6e-08 | 32.7 | 7.5e-12 | 5.6e-08 | 32.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3055.1_19016.t1 | gi|524881079|ref|XP_005097195.1| | PREDICTED: sialomucin core protein 24-like [Aplysia californica] | 3.0e-13 |
| pfu_aug2.0_3055.1_19016.t1 | gi|241093887|ref|XP_002409430.1| | mucin core protein, putative [Ixodes scapularis] | 9.0e-12 |
| pfu_aug2.0_3055.1_19016.t1 | gi|12584532|emb|CAC27414.1| | MGC-24 protein, partial [Gallus gallus] | 3.0e-11 |
| pfu_aug2.0_3055.1_19016.t1 | gi|676484872|ref|XP_009063483.1| | hypothetical protein LOTGIDRAFT_235716 [Lottia gigantea] | 8.0e-11 |
| pfu_aug2.0_3055.1_19016.t1 | gi|195326425|ref|XP_002029929.1| | GM25179 [Drosophila sechellia] | 8.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_3055.1_19016.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3055.1_19016.t1 atgtcaggacttgggaattacataaatgctgcaatcatttctttaactattgttttcttggtggtaccatatggttttgg ggaagatgtttgcaatggactagatcaagaaaaatgttgtcaaacgcaaggctgctcttttattgactgtgtttacaatg agacggccaaccatacaggctgtcatgacatgaacaatgagacagatgccttggcagcggcacaggattgtaatgttaca agtccagccaaccttacttcagacagcattgtttgcacagctacatttgctactgtgtcatgtgtcaactttacggagga gacttcttgctgtaacgagacatcaggtctgaactgtagttgggtgtcggcatgtcccaaagatacatcattcaaagact gtgcagagtacaatacaactgccttagaagataaatgtggagccgatcttgtggaccaatgtagaccccctgttgcagtc acatgtatgagtttcaccaaccagccagactgctgtaatagcaccaatggtctgaactgcagctgggtgtcagaatgtcc tggcaacacaacaattacattgccttattgttttgaatcatcagcggctgcagtaacctgtggtacaggattcaatgatc aatgcagtggatttacccctgtagatatctgtgcgacactggacacaactgagaaatgctgtaaccagtctggatgcagc tggatcaccggctgtacaaataacagtacaggagtgccgtattgttttgaatcatcagcggctgcagtaacctgtggtac aggattcaatgatcaatgcagtggatttacccctgtagatatctgtgcgacactggacacaactgagaaatgctgtaacc agtctggatgcagctggatcaccggctgtacaaataacagtacaggagtgccgtattgcactacatttaatgagtcccta ctgaatgaaacatgtggtttccaagggtacaatgactcatgtcaagggcaaggaccaagtacaactgtacctgggtcaac tacaactgtcgcaccatcaacaggaggaaaaggtgactgtagtggacagcattttgacggtgcttcgttcgttggaggaa ttatactgactgccggcataatcgttctggccttctttggatataaattctacaaatctcgtcaggacaggaattatcat acgttgtaa |
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Protein
| Protein ID | pfu_aug2.0_3055.1_19016.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3055.1_19016.t1 MSGLGNYINAAIISLTIVFLVVPYGFGEDVCNGLDQEKCCQTQGCSFIDCVYNETANHTGCHDMNNETDALAAAQDCNVT SPANLTSDSIVCTATFATVSCVNFTEETSCCNETSGLNCSWVSACPKDTSFKDCAEYNTTALEDKCGADLVDQCRPPVAV TCMSFTNQPDCCNSTNGLNCSWVSECPGNTTITLPYCFESSAAAVTCGTGFNDQCSGFTPVDICATLDTTEKCCNQSGCS WITGCTNNSTGVPYCFESSAAAVTCGTGFNDQCSGFTPVDICATLDTTEKCCNQSGCSWITGCTNNSTGVPYCTTFNESL LNETCGFQGYNDSCQGQGPSTTVPGSTTTVAPSTGGKGDCSGQHFDGASFVGGIILTAGIIVLAFFGYKFYKSRQDRNYH TL |
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