Gene
| Gene Model ID | pfu_aug2.0_3074.1_15705 |
|---|---|
| Locus | scaffold3074.1 : 17842 ... 24115 : - |
| To GenomeBrowser | scaffold3074.1:17842..24115 |
| Genes list of scaffold | scaffold3074.1 |
| Synonym | pfu_aug1.0_47217.1_41403 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| low quality protein: serine threonine-protein kinase sik3-like | GO:0016740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3074.1_15705.t1 | 1 | 1 | KA1 | 300 | 339 | 3.2e-06 | 26.4 | 3.4e-10 | 5.1e-06 | 25.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3074.1_15705.t1 | gi|585700268|ref|XP_006812753.1| | PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase SIK3-like [Saccoglossus kowalevskii] | 2.0e-11 |
| pfu_aug2.0_3074.1_15705.t1 | gi|260836733|ref|XP_002613360.1| | hypothetical protein BRAFLDRAFT_118747 [Branchiostoma floridae] | 6.0e-11 |
| pfu_aug2.0_3074.1_15705.t1 | gi|699247054|ref|XP_009859917.1| | PREDICTED: uncharacterized protein LOC100182214 [Ciona intestinalis] | 3.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_3074.1_15705.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3074.1_15705.t1 atgatcagagaggactcccaagacatggtggagaattcaaacagtgacgaagacgcgatgcaagtccaagagaatccgtc gtcaaaaactgccacggcatcgcagcaagatctgcaacatcagcacttcgcattgaagccccagatcagtatcacagata ctcatgggcatgtaacgtcagtcacggccgacggagacgatcaggtgacgatggagggacaaaattctcatgctagtgac ttagtcacgtcaggtcacatgacattccatagcaacgggtctgccattcatagcaacacacactcatcacacatgtatca ctcatcgtctagtttaccgcagtattcacatggcattaatcatcaatcatctgtgcaaagcaacttatataactcgcatt tcaccggattacctacacaaatatcagaaaagacggtgccaaatagtgcattctgggatgccacccagggagaggtacca tatacggtaccatggtcaaactctactttatatcgtccccagaggccaagccaagcacgttcgtatggtttacggcattt tgacaatattgacctttcctctgtgcagacttgtcaggccaatattggtatgatgcatacaggttccgtcgaaacgatca atagaaactctaattccggaaaatcttcacaagcaatagacttgagcatcaagagtagacaagacacgtcttcacctaca ttcctaggtcaaggtcattacagttctcctgaccttgacattcacaaagtcaattctagtataaacctggcctctacacg gacagtggacgatatactttgcgagattaagcgaattttacaggtgcgcaatgaggaaaaagtgacacagttttcggaca gattatttcgactcgaaaattctgatgtgcaaatggagctggaagtgtgccaaggcgagagctataacgggttacaggtg cgaagaatctcgggtgacaaaggtcactatagattgctctgccaggaattactggcgggaataaatctgtga |
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Protein
| Protein ID | pfu_aug2.0_3074.1_15705.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3074.1_15705.t1 MIREDSQDMVENSNSDEDAMQVQENPSSKTATASQQDLQHQHFALKPQISITDTHGHVTSVTADGDDQVTMEGQNSHASD LVTSGHMTFHSNGSAIHSNTHSSHMYHSSSSLPQYSHGINHQSSVQSNLYNSHFTGLPTQISEKTVPNSAFWDATQGEVP YTVPWSNSTLYRPQRPSQARSYGLRHFDNIDLSSVQTCQANIGMMHTGSVETINRNSNSGKSSQAIDLSIKSRQDTSSPT FLGQGHYSSPDLDIHKVNSSINLASTRTVDDILCEIKRILQVRNEEKVTQFSDRLFRLENSDVQMELEVCQGESYNGLQV RRISGDKGHYRLLCQELLAGINL |
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