Gene
| Gene Model ID | pfu_aug2.0_3074.1_15707 |
|---|---|
| Locus | scaffold3074.1 : 31302 ... 49445 : - |
| To GenomeBrowser | scaffold3074.1:31302..49445 |
| Genes list of scaffold | scaffold3074.1 |
| Synonym | pfu_aug1.0_5699.1_16736 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein kinase sik3 isoform x1 | GO:0007275 GO:0009653 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3074.1_15707.t1 | 2 | 1 | Pkinase | 22 | 108 | 0.0 | 163.5 | 9.3e-24 | 4.6e-20 | 71.8 |
| pfu_aug2.0_3074.1_15707.t1 | 2 | 1 | Pkinase_Tyr | 23 | 109 | 1.8e-24 | 86.2 | 3.2e-19 | 1.6e-15 | 56.8 |
| pfu_aug2.0_3074.1_15707.t1 | 2 | 2 | Pkinase | 105 | 219 | 0.0 | 163.5 | 5.2e-30 | 2.5e-26 | 92.3 |
| pfu_aug2.0_3074.1_15707.t1 | 2 | 2 | Pkinase_Tyr | 106 | 215 | 1.8e-24 | 86.2 | 1.2e-10 | 6.1e-07 | 28.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3074.1_15707.t1 | gi|632977723|ref|XP_007905506.1| | PREDICTED: serine/threonine-protein kinase SIK3 isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_3074.1_15707.t1 | gi|532006950|ref|XP_005347310.1| | PREDICTED: serine/threonine-protein kinase SIK3 isoform X2 [Microtus ochrogaster] | 0.0 |
| pfu_aug2.0_3074.1_15707.t1 | gi|532006948|ref|XP_005347309.1| | PREDICTED: serine/threonine-protein kinase SIK3 isoform X1 [Microtus ochrogaster] | 0.0 |
| pfu_aug2.0_3074.1_15707.t1 | gi|524930664|ref|XP_005069529.1| | PREDICTED: serine/threonine-protein kinase SIK3 isoform X2 [Mesocricetus auratus] | 0.0 |
| pfu_aug2.0_3074.1_15707.t1 | gi|511851956|ref|XP_004750295.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3074.1_15707.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3074.1_15707.t1 atggcggcgttaaaaccaggccaaaaggccttgcaccactctgggatcgttagagtgggttattatgagattgaaaggac gattggcaagggaaacttcgcagttgtaaagttagcaacccatatcgccacaaaaacaaaggttgccataaagataatag ataaaactcagttagatgacgacaacctgaccaaaattttcagagagataaaaatcatgaagttactgaaacatcctcat atcatacgactttatcaggtgatggagacagagaggatgctgtatctagtcacagagtacgctagtggaggggaaatctt tgactttggcttcagtaattttttctccagtaataacatgttaaagacgtggtgtggatctccgccctacgccgccccag aactgtttgagggtaaagaatacgcagctcctggtgtcgatatatggagtcttggtgtagtcctatatgtattagtttgt ggtgctctgccgtttgacggaagtacgttaatgagtttgagaggacgagttcttggcgggaaatttagagttccatttta catgtctacagagtgtgagaaccttatcaagcagatgttaacggtggatcctgcaaaacgaataacgattgatcaaatcc tgaatcatcggtggatgaagcagggcgaggaggatccagaatttgaggagatgttgtacgaatataaccgtccgagcgac gtggatccagacgtagagaatctcaacgagttaatactgtcacatatcgagtcgttaagactggacagggataaagccga ggagtcagtacggaatcaagcgcacgatcaccatagtgctgtttatcatctattattagacaaactccgtaaacactcag taaaaacaagtgtaggaaaagttcaaagcatgtgtataccaaatattcctatagccatgaaaacagagaggaggtctagc atcacgacaggtgtggtggagagaaaagaagttgagaccaagccggctatcccatcatcccttggggcacctgtcattcc tcatgtacagttctacgatgagaataatcaactcactgagcctgatcactcagatcaaggggaggagaccagcagccagc actcagactccgacagtgaagaaccgtctccggaggccctggcccggtacctagccatgcggcgacataccgtaggtgtc ggtgacagtaggcatgaggtaccggaggatgcacgagtcaaactggcaaataatcaaccccttatagcgtcacctcaggc taacttattcagaccgttgggctttccacatgttaatgtacaacagactctaccttacgtgccaaatgagatgaactttg tatacgagcaggaagtgaaggaccagaacctattacagcttccctccatgtttggacccggtaagtga |
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Protein
| Protein ID | pfu_aug2.0_3074.1_15707.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3074.1_15707.t1 MAALKPGQKALHHSGIVRVGYYEIERTIGKGNFAVVKLATHIATKTKVAIKIIDKTQLDDDNLTKIFREIKIMKLLKHPH IIRLYQVMETERMLYLVTEYASGGEIFDFGFSNFFSSNNMLKTWCGSPPYAAPELFEGKEYAAPGVDIWSLGVVLYVLVC GALPFDGSTLMSLRGRVLGGKFRVPFYMSTECENLIKQMLTVDPAKRITIDQILNHRWMKQGEEDPEFEEMLYEYNRPSD VDPDVENLNELILSHIESLRLDRDKAEESVRNQAHDHHSAVYHLLLDKLRKHSVKTSVGKVQSMCIPNIPIAMKTERRSS ITTGVVERKEVETKPAIPSSLGAPVIPHVQFYDENNQLTEPDHSDQGEETSSQHSDSDSEEPSPEALARYLAMRRHTVGV GDSRHEVPEDARVKLANNQPLIASPQANLFRPLGFPHVNVQQTLPYVPNEMNFVYEQEVKDQNLLQLPSMFGPGK |
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