Gene
| Gene Model ID | pfu_aug2.0_308.1_27191 |
|---|---|
| Locus | scaffold308.1 : 522 ... 2222 : + |
| To GenomeBrowser | scaffold308.1:522..2222 |
| Genes list of scaffold | scaffold308.1 |
| Synonym | pfu_aug1.0_17751.1_61744 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_308.1_27191.t1 | 2 | 1 | zf-B_box | 16 | 56 | 1.3e-12 | 47.4 | 2.3e-06 | 0.0034 | 17.2 |
| pfu_aug2.0_308.1_27191.t1 | 2 | 2 | zf-B_box | 69 | 104 | 1.3e-12 | 47.4 | 4.0e-12 | 5.9e-09 | 35.6 |
| pfu_aug2.0_308.1_27191.t1 | 4 | 1 | SGL | 294 | 334 | 6.2e-08 | 32.3 | 0.00014 | 0.21 | 10.9 |
| pfu_aug2.0_308.1_27191.t1 | 5 | 1 | NHL | 295 | 305 | 6.0e-10 | 38.5 | 2.4 | 3500.0 | -1.8 |
| pfu_aug2.0_308.1_27191.t1 | 5 | 2 | NHL | 335 | 344 | 6.0e-10 | 38.5 | 1.7 | 2600.0 | -1.3 |
| pfu_aug2.0_308.1_27191.t1 | 4 | 2 | SGL | 355 | 432 | 6.2e-08 | 32.3 | 7.4e-05 | 0.11 | 11.8 |
| pfu_aug2.0_308.1_27191.t1 | 5 | 3 | NHL | 424 | 440 | 6.0e-10 | 38.5 | 0.00017 | 0.25 | 11.4 |
| pfu_aug2.0_308.1_27191.t1 | 4 | 3 | SGL | 424 | 488 | 6.2e-08 | 32.3 | 0.0033 | 4.9 | 6.4 |
| pfu_aug2.0_308.1_27191.t1 | 5 | 4 | NHL | 460 | 484 | 6.0e-10 | 38.5 | 4.8e-07 | 0.00071 | 19.4 |
| pfu_aug2.0_308.1_27191.t1 | 5 | 5 | NHL | 507 | 518 | 6.0e-10 | 38.5 | 0.058 | 86.0 | 3.3 |
| pfu_aug2.0_308.1_27191.t1 | 4 | 4 | SGL | 507 | 522 | 6.2e-08 | 32.3 | 0.13 | 200.0 | 1.1 |
Transcript
| Transcript ID | pfu_aug2.0_308.1_27191.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_308.1_27191.t1 atggcattttcaaaatcagtcaacctggttcatgcccaaacagctgttccatgcgatgcttgtgaagccaaagctcctgg agaatactattgtatagaatgtaaacatacactctgccctccgtgtgagaaaatacatgggaagttcaccaaaggtcaca atgtagtactacgaactcaaataggtaagatagataccaacatctttacttgtgctgaacatggaaaccaaaataccttt cactgtgaaaaatgtaataaaccagtctgcggaacatgcatcactgaaaagcacaaaggacatgacctgactggcctgaa tgatatttttgagaaggagaagaacacacttcagaatcgtctcacaaccatgcaacaaaaatcactacctacactagaga aattcaaagatcaaatactagaattaaagggaaattatgcaaacaaaataaaggaaatcaccaaagatatggaaagtgag aatcgggctctacataaagaactagatcgaatccatgatgacagaatgaaacgaatatcaagcatggaaatatcccattt attaatgtttgacggttgcactacaaaaattgaaaagaaaattgagctttttgcggggaaaatatcagagcatcgagaag ccattggagggaaaagtttacctgctattctaaatcttgcaaaaaaggaagtgtcccttccaagtatagactataaacta gaagttcctcaaccaccttcttttgtacctggaaacgcagaaaatttggaagaaattatcggcagattactcatgccccc gcactcaatagtttatccatttgatataattaacccgacaattgtatcaaagttcaaatgtccaacccaaggacaaccat ccctttgtataacaaaggaaggtgatgtttggctcggtggacttgattccaaaaaattggttttggttgacgtaaaaggc aatgtactcaggacgataaaagtacagaatagaatttgtgcattggctgtgttggactgcggggacattattatgagtta tctttccaaagactcgtcgtgggtgggaagactggatacagatggcaaagaacagcaggtttttgattcatcaccatcct taaccaatggagtgtctgtcacggctgaccagaaaatattaatttgcactgaagatgggagagtaatgaggaccaatcgt gacggttctaacgtcaaacagatctacaaaggttctggaaaaggttcggcgttacatgctgtagagaacgcagagggaaa catctacgtaactgacaagagaaattcttctgttgtgataatcagtaaagatggaaaaactctgtcaacatttacacaaa cgatggacggacagaaatttgcatggccgatgggtttagttgtagacaaaatgggtaacgctttaattgcagatcgtgag aatcattgcgtatatatcatagaccaaagactacagattaaagtgttgttttcgtgttcagatagcactcctcgctggat tgctatagacaatgatgacaatctttggattgctcagagagaaggaaacatcctcgttataaagtacttagctttatag |
|
Protein
| Protein ID | pfu_aug2.0_308.1_27191.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_308.1_27191.t1 MAFSKSVNLVHAQTAVPCDACEAKAPGEYYCIECKHTLCPPCEKIHGKFTKGHNVVLRTQIGKIDTNIFTCAEHGNQNTF HCEKCNKPVCGTCITEKHKGHDLTGLNDIFEKEKNTLQNRLTTMQQKSLPTLEKFKDQILELKGNYANKIKEITKDMESE NRALHKELDRIHDDRMKRISSMEISHLLMFDGCTTKIEKKIELFAGKISEHREAIGGKSLPAILNLAKKEVSLPSIDYKL EVPQPPSFVPGNAENLEEIIGRLLMPPHSIVYPFDIINPTIVSKFKCPTQGQPSLCITKEGDVWLGGLDSKKLVLVDVKG NVLRTIKVQNRICALAVLDCGDIIMSYLSKDSSWVGRLDTDGKEQQVFDSSPSLTNGVSVTADQKILICTEDGRVMRTNR DGSNVKQIYKGSGKGSALHAVENAEGNIYVTDKRNSSVVIISKDGKTLSTFTQTMDGQKFAWPMGLVVDKMGNALIADRE NHCVYIIDQRLQIKVLFSCSDSTPRWIAIDNDDNLWIAQREGNILVIKYLAL |
|