Gene
| Gene Model ID | pfu_aug2.0_308.1_27193 |
|---|---|
| Locus | scaffold308.1 : 36325 ... 38213 : + |
| To GenomeBrowser | scaffold308.1:36325..38213 |
| Genes list of scaffold | scaffold308.1 |
| Synonym | pfu_aug1.0_911.1_29473 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_308.1_27193.t1 | 2 | 1 | zf-B_box | 16 | 56 | 1.6e-13 | 50.2 | 1.5e-06 | 0.0022 | 17.8 |
| pfu_aug2.0_308.1_27193.t1 | 2 | 2 | zf-B_box | 70 | 104 | 1.6e-13 | 50.2 | 8.9e-13 | 1.3e-09 | 37.7 |
| pfu_aug2.0_308.1_27193.t1 | 6 | 1 | NHL | 294 | 304 | 6.8e-06 | 25.7 | 3.5 | 5200.0 | -2.3 |
| pfu_aug2.0_308.1_27193.t1 | 6 | 2 | NHL | 334 | 344 | 6.8e-06 | 25.7 | 0.2 | 300.0 | 1.6 |
| pfu_aug2.0_308.1_27193.t1 | 6 | 3 | NHL | 376 | 388 | 6.8e-06 | 25.7 | 1.8 | 2600.0 | -1.4 |
| pfu_aug2.0_308.1_27193.t1 | 6 | 4 | NHL | 421 | 439 | 6.8e-06 | 25.7 | 0.0013 | 2.0 | 8.5 |
| pfu_aug2.0_308.1_27193.t1 | 6 | 5 | NHL | 471 | 483 | 6.8e-06 | 25.7 | 0.53 | 790.0 | 0.3 |
| pfu_aug2.0_308.1_27193.t1 | 6 | 6 | NHL | 504 | 519 | 6.8e-06 | 25.7 | 0.00092 | 1.4 | 9.0 |
Transcript
| Transcript ID | pfu_aug2.0_308.1_27193.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_308.1_27193.t1 atggctctttcaaaatcagccaaccttgcgcatgcccaaacagcggttccatgcaatgtctgtgaagacgaaactcccgg agaatactactgtatagaatgtaaacataccctctgtccgctttgtgagaaattacatagaaagttcaccaaaggtcaca atgtagtcctaaggacccaagtagatgacatagataccacaatccttacctgtactgaccatggagaccaagcctcattt ctctgtgagaaatgtaacataccagtctgtggtcaatgtatcactggacaacacaagggacatgatctcactggcctgaa tgatatcttcgagagggagaagggggcccttcagaaccatcttacaagaatgcaacaagaagtattaccaacacttgaga aaaggagaaaggagatacttagactgaaaggaaattatgaaaatcaaataaaggaaataaccaaagacatggaagcagag actcagacactacataaagatctggatcggattcatgaaaacaggatggaacgaataatcaatatagaaaaatctcatct atcaacgttcgacggttgtactacagaaattgaaggaaaaattgagtttgtaaaaggaaggatatcaaagtatcgggagg taattgaaaataacagtcttccacttattttgaatcttgctaaacaaaagaaatctctaccggtaattgagagtaaactt caattaccccaacctccttctttcgtacatggaaatacaaagaagctagaagaaaatctaggtaaattgatatcttcttt ctcagatgtgaggtcactaaaattaacatcagcgaaaaaagtttcaaaattcaaatctccattgaaatcctattcaccga tttgcataacaaaggagggtgatatatggcttggtggaaatgaatgcagagagctggtaatggtggacatcgacggaaat gtgctcaggaggagaaagatacaaaacagacctaaatacttggcagtgatggattgcggtgacgtcattataagtcctca gggcgatgattctagctcagtcaacagacttttagcaaatggaagtgaacagcacgtctttgacacgtccccttcgagaa gtctcggtgtgaccgttacagctgaccagagaatacttatttgtacatgtgatggaagagtaatgagtatcaatggagac ggcaacaacgtacaacaggtatacaagggatctggtgaacgttctttaacacacgctgtagaaagcacaaaaggtagaat ttacatatgtgagtgtagaaattctgctgttgtggttattagtaaaactggaaaagtgttatcaacaataacacaatcga tcaacggcaaagaattgatctggccattagctttagttgaagacaagataggaaacattttactctcagatcgcgatagt cattctgtatacatcatagaccagaatttacagatgacggagttagttggaagttcacttggtattgtacatcctttgag gcttgctgttgatagcgataataatctgtggatagcacagagaatgagaaatatccacgttgtgaagtatttggtctaa |
|
Protein
| Protein ID | pfu_aug2.0_308.1_27193.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_308.1_27193.t1 MALSKSANLAHAQTAVPCNVCEDETPGEYYCIECKHTLCPLCEKLHRKFTKGHNVVLRTQVDDIDTTILTCTDHGDQASF LCEKCNIPVCGQCITGQHKGHDLTGLNDIFEREKGALQNHLTRMQQEVLPTLEKRRKEILRLKGNYENQIKEITKDMEAE TQTLHKDLDRIHENRMERIINIEKSHLSTFDGCTTEIEGKIEFVKGRISKYREVIENNSLPLILNLAKQKKSLPVIESKL QLPQPPSFVHGNTKKLEENLGKLISSFSDVRSLKLTSAKKVSKFKSPLKSYSPICITKEGDIWLGGNECRELVMVDIDGN VLRRRKIQNRPKYLAVMDCGDVIISPQGDDSSSVNRLLANGSEQHVFDTSPSRSLGVTVTADQRILICTCDGRVMSINGD GNNVQQVYKGSGERSLTHAVESTKGRIYICECRNSAVVVISKTGKVLSTITQSINGKELIWPLALVEDKIGNILLSDRDS HSVYIIDQNLQMTELVGSSLGIVHPLRLAVDSDNNLWIAQRMRNIHVVKYLV |
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