Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_308.1_27195
Locus scaffold308.1 : 67868 ... 80385 : -
To GenomeBrowser scaffold308.1:67868..80385
Genes list of scaffold scaffold308.1
Synonym pfu_aug1.0_911.1_29474

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_308.1_27195.t1 gi|676432919|ref|XP_009046731.1| hypothetical protein LOTGIDRAFT_199612 [Lottia gigantea] 0.0
pfu_aug2.0_308.1_27195.t1 gi|390343945|ref|XP_003726002.1| PREDICTED: LOW QUALITY PROTEIN: testis-expressed sequence 9 protein [Strongylocentrotus purpuratus] 0.0
pfu_aug2.0_308.1_27195.t1 gi|260798546|ref|XP_002594261.1| hypothetical protein BRAFLDRAFT_275559 [Branchiostoma floridae] 0.0
pfu_aug2.0_308.1_27195.t1 gi|632938384|ref|XP_007904753.1| PREDICTED: testis-expressed sequence 9 protein [Callorhinchus milii] 0.0
pfu_aug2.0_308.1_27195.t1 gi|573881290|ref|XP_006628842.1| PREDICTED: testis-expressed sequence 9 protein-like [Lepisosteus oculatus] 0.0

Transcript
Transcript IDpfu_aug2.0_308.1_27195.t1
Definition-
>pfu_aug2.0_308.1_27195.t1
atggattccaatagtggaagcagagccagctcggcaaagccaagtcggccagtgtcaggaagaaaatcttcacacaatgt
taaaaatactaacatatcaagtggcggaggaatacgagatctggctagcaaagaggaagagtacaagaggttaaatgcag
aacttgaagcaaagacagccaaccttgtcagagaggcagaggaagttctcagagagcaagagtctgcactatccaaatcc
aggttattggacaatatcaactctgaagaatttctcaaagactttgatgatgacttcagtagacctaatgaaaatgttcc
tgtatcaaagcctccatcccgtccatcttcaaaattgaccaatcaaacacagagcagacctcagtcaaagaccaaactgc
cggcaaagccccgccccaaaagtgggaaatccaacctagccgacaatgttgctgtaccagatgatgcattcatcaccgac
tttaaaaacttttcttttgaaaatgccattacaaatattgaggggaaagtagatgacaatgatttaccagatgacgatga
tgatgatgtaataccacaggcagctgcagatatgggatctgaggccaccatcaggttcctgaaggcaaaattacgtgtga
tgcaggaggaattggacaggttaggccaggagtgtaataaaaaggatgaagctaatacagttttatcaagccgaatcaag
gagctggaggatgagaggggccgacttcacagaacgaacgcctcacagcaaactcagattgacaagtttaaaagcattgc
cgaggaagccaaggggaagtcagatagcttagatacacagctagctagtgttagaaaggaacttgacggattaaaaagat
cacaaaaacaacaagcgtcgtcccaatctgccacagaagtaagacttaacagagcattagaggaaatagagaggtacaaa
gatcaactacatagatccaaatctgcatctaaggaatcaactgaccaagaaagaaggaaaatggaccaattattagctga
caataagagactagagaaacagaaaaatgagctgatgactggcttcaaaaaacaactcaaacttattgatgttctgaaga
gacaaaagatgcacgtagaagcagctaaaatgttagcattctcagaagaggagtttgtcaaagccttagagtggggaagc
taa

Protein
Protein IDpfu_aug2.0_308.1_27195.t1
Definition-
>pfu_aug2.0_308.1_27195.t1
MDSNSGSRASSAKPSRPVSGRKSSHNVKNTNISSGGGIRDLASKEEEYKRLNAELEAKTANLVREAEEVLREQESALSKS
RLLDNINSEEFLKDFDDDFSRPNENVPVSKPPSRPSSKLTNQTQSRPQSKTKLPAKPRPKSGKSNLADNVAVPDDAFITD
FKNFSFENAITNIEGKVDDNDLPDDDDDDVIPQAAADMGSEATIRFLKAKLRVMQEELDRLGQECNKKDEANTVLSSRIK
ELEDERGRLHRTNASQQTQIDKFKSIAEEAKGKSDSLDTQLASVRKELDGLKRSQKQQASSQSATEVRLNRALEEIERYK
DQLHRSKSASKESTDQERRKMDQLLADNKRLEKQKNELMTGFKKQLKLIDVLKRQKMHVEAAKMLAFSEEEFVKALEWGS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495