Gene
| Gene Model ID | pfu_aug2.0_308.1_27199 |
|---|---|
| Locus | scaffold308.1 : 185072 ... 208134 : - |
| To GenomeBrowser | scaffold308.1:185072..208134 |
| Genes list of scaffold | scaffold308.1 |
| Synonym | pfu_aug1.0_2407.1_15798 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_308.1_27199.t1 | 4 | 1 | Chitin_synth_2 | 93 | 140 | 2.1e-26 | 92.4 | 1.1 | 2300.0 | -3.4 |
| pfu_aug2.0_308.1_27199.t1 | 4 | 1 | Glyco_trans_2_3 | 175 | 203 | 3.2e-16 | 59.5 | 6.5 | 14000.0 | -4.5 |
| pfu_aug2.0_308.1_27199.t1 | 4 | 2 | Chitin_synth_2 | 473 | 505 | 2.1e-26 | 92.4 | 0.46 | 970.0 | -2.2 |
| pfu_aug2.0_308.1_27199.t1 | 2 | 1 | Glycos_transf_2 | 483 | 533 | 1.9e-06 | 27.6 | 0.021 | 44.0 | 3.7 |
| pfu_aug2.0_308.1_27199.t1 | 2 | 2 | Glycos_transf_2 | 614 | 715 | 1.9e-06 | 27.6 | 7.7e-08 | 0.00016 | 21.3 |
| pfu_aug2.0_308.1_27199.t1 | 1 | 1 | Glyco_transf_21 | 616 | 777 | 2.5e-08 | 33.4 | 3.2e-11 | 6.7e-08 | 32.0 |
| pfu_aug2.0_308.1_27199.t1 | 1 | 1 | Glyco_tranf_2_3 | 625 | 779 | 1.1e-12 | 48.2 | 8.5e-16 | 1.8e-12 | 47.5 |
| pfu_aug2.0_308.1_27199.t1 | 4 | 3 | Chitin_synth_2 | 628 | 874 | 2.1e-26 | 92.4 | 9.7e-30 | 2.1e-26 | 92.4 |
| pfu_aug2.0_308.1_27199.t1 | 4 | 2 | Glyco_trans_2_3 | 630 | 830 | 3.2e-16 | 59.5 | 1.5e-19 | 3.2e-16 | 59.5 |
| pfu_aug2.0_308.1_27199.t1 | 4 | 4 | Chitin_synth_2 | 925 | 989 | 2.1e-26 | 92.4 | 0.00037 | 0.78 | 8.0 |
| pfu_aug2.0_308.1_27199.t1 | 4 | 3 | Glyco_trans_2_3 | 929 | 968 | 3.2e-16 | 59.5 | 7.0 | 15000.0 | -5.5 |
| pfu_aug2.0_308.1_27199.t1 | 2 | 1 | SAM_2 | 1032 | 1086 | 4.1e-22 | 77.8 | 3.2e-12 | 6.7e-09 | 35.4 |
| pfu_aug2.0_308.1_27199.t1 | 2 | 1 | SAM_1 | 1033 | 1092 | 2.7e-21 | 75.5 | 4.0e-10 | 8.5e-07 | 29.0 |
| pfu_aug2.0_308.1_27199.t1 | 2 | 2 | SAM_2 | 1104 | 1167 | 4.1e-22 | 77.8 | 1.5e-13 | 3.2e-10 | 39.6 |
| pfu_aug2.0_308.1_27199.t1 | 2 | 2 | SAM_1 | 1104 | 1167 | 2.7e-21 | 75.5 | 9.1e-15 | 1.9e-11 | 43.9 |
| pfu_aug2.0_308.1_27199.t1 | 4 | 4 | Glyco_trans_2_3 | 1232 | 1273 | 3.2e-16 | 59.5 | 0.67 | 1400.0 | -1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_308.1_27199.t1 | gi|260795456|ref|XP_002592721.1| | hypothetical protein BRAFLDRAFT_67161 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_308.1_27199.t1 | gi|260794933|ref|XP_002592461.1| | hypothetical protein BRAFLDRAFT_68947 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_308.1_27199.t1 | gi|449671589|ref|XP_004207525.1| | 0.0 | |
| pfu_aug2.0_308.1_27199.t1 | gi|156385252|ref|XP_001633545.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_308.1_27199.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_308.1_27199.t1 atggcgagtacatctcaacagtcgggatctcacatgaaagagaaaggtaatcctttagctgtgacagggaaggcaaaatt agaccggtttaatgaacgcaaggagtctttgaataaacgaccatcaacacttttagtcatcagcaaatggatggtcactg gtgtttttggacttcttctcttgttctgtttgtccttcaacaaattatcgattgtagcaacagggagatggcatttgaag aaggatggtgatcatgaccctcagcggatagttatgctttttacaataattattattccgtatgccattactttcctccg gtcagtttgggtcaccataggacgtaaagacctgccaaggccaaaaacatcagcaataatttactgcatcgttgccagtc tattggaggtgatcggaattactctggtagcttgtgaagtcattgtaggtgagaaggcatatatacccgtactgcttatg aatgctgttcttcttcttcccttatcatctttgacagctcaaaattggaggaacaaaagttggcgacttattctctctac gatattttcccttcttggaacaacagcaacgatagttctgctgtttttaggtaacccagatatagaaaatacagtcatac ttcttgttggtatctttcttgtctctatatcgtggatgccttggcttcaagagaaaatgatggaaatcaaaatcgaacag ccaatacaagaaattcctgaggaaattcctaaaggatcattcaggttggaacagtttgcacaaaataacagagtcacaga tttacgagctatgcaaatatctgaaaacaattcccactggaggtcactgcgtatttcatccttcatcaaacttatttcta cgctgccagctatacttatttacgaaggaatcagtggtaggaacttttcgaacgttttcagtgattttaaagacggatgg tcgagcagtgactggtctcctaacgtaatgcttttgtggtttttcgtctcgaacgtgcttacggctgttctaggttatat ggttgcagtatttgcctgcaggacttgtatggaccggggagcttttgtgttgcctcttttcctttcgacacctttaacag tagcacttcttacggtttacgacccatgttctgtacttcttgaccatgttgataaaagcacgaactgtggcaatccaaca gatgtaaaaacaatagcgcttatagcggcatcagtgttatgttttgccgtgtcacaggcgctttctgtcggctttaatgc ttttaatggttcatccataattctcgagaaagagactaagcttttccggttcgcctcatttaacggagtgtttctagaac agtggctacttgtagataaaagacaagattttgaaggattggaccggaactctcaacaatcgcaacacaagaaatccaaa gtcttcatttgtactaccatgtataacgagaatcaaacggagatgaagcaattattagaatctgtatacgccgtgaatgc cgctcagatctctggcgatcagacgtcttgccattttgagtcccatatcttccttgacgggtcaatcagagacgatgact tacaagagaacgctttacgcttacttagtcttctaccggaaagtctcggaatcgttgatttgagaaaaggaacaaagata ataacaccatacggtatggcaatatcctggaaactcccgacaccgaatggtctcaatggaatgaactttactatccattt caaagatattaggaaggtgaaaaacaagaagagatggagtcaaataatgtacatttcatatgtactggatttcctcaaca aaaacttcaagcaaggcacagattcgtcttcggaagatgacagtttcatactcacaactgatgcagacgttaggtttgaa gctactgacgtagagactctcctggacttaatgacacgtgatcacacagtgggagcagtctgcgcacgcacctatccctt gggtagtggacctctcgtatggtatcaaaagttcgagtatgcaataggccattggttccagaaggctgctgaacacgtcc ttggatcagttttgtgtgcaccgggatgtttcagtgtttacagatgttctgcattaagagacatagtccctatctacgct acaggagtgaagaaagcattcgacttccttatcaaggacatgggagaagatagatggctctgtacacttatggtacaaag tggatggagaatagagtattgtgcggcctctcaaaataaaacttattgtcctgaagattttgatgagttctttaaacaaa gacgacgatggattgcatcgacaatggcaaatatctggaagctgatcgctgaatggtcatttatccacggcatgaatcac aaggtatccattctgttctgtatgtaccaaatattcctgttcgcctccaccatcgttggaccaagtggattagtgtatgc ttggggagctaacttggtagtaacaatggtgctccagattatcgtctgcttactgttttcactggcgtgtatcaagctta agtcatctcaacagctcatgattgcaaaaatcctgacctttttgtactcgatgataatggcggccgtggctgtaggtgta gcaattcaagtagctaatgactttgagaatccagacacaggtgaaacagacgactacccagattaccctgatgaacccac agtctctactaaaaaacctgatgctatttccatccacataccgtactcagtgaccaccgtgtaccttacagcgttagcct cacttttctttgtgactggtctgctacattttaaggaagtgattaacttattgtatggactaatctacctactatgtctg ccatcctgttaccttattctgcttatctacaccatttgtaatattacagaccgatcatgggaaagtaaagaagagaccga agttgacattttggaatcccaggaggtgattacggagacggcagaagtatggatcccatcaggttcacagaccttgagtg gaaagaagggaaccaaaaccattgttacacgacgaaaacctataaatgatgggagcaaatcagtagaagaatggttaaag gacaaaaaattgattgaacaatatgctgagcagttcaaggaacatggatacgagaacactctgttcttatctggaatgga cgaaaagactctcacaaagaaaataggtgttaataagctagctcacaagatcaatttaatggggatgatagaccggatac caaactttgacatcgatgttggagtaccgaacaatgtcggaacttggttggacaccataggactttggatgtataaaact aacttcgaagcagcctccattaaaacccctgagagtttggaagctttgaaagatatgtccaaagaacagctaaaagagga actcggcattacaaaacacggtcaccgtaaacggttgctgattgcaatagataaacttaggtacccaacagaagatgaag aaacatatttaatggtgagaaaaacggtttcggaaattgattggaagctgttaaaagatatcaataaagatgaacacaaa ttttgggaagatcttatcaacgtttgcttagtaccgaatcgggatgcatttggaagaatatcagaactaaaagagggttt agagtccttacgcctgcatgctctattaggaggttgggccgtgaactgcctatggatggtcctagcgcttactctgtctg gttcagctcagctgacagcagcaggcacaaatcctctgggattggccttcctacttatattcggacttatcttcatcatc caattcctctgtatgatcgtacatcgacttgaaacattggctcacttcattgcacgattaccgtacaagctgagtggtca tttccgacaaagctggacctttggggaaggtgaggaaagtcaactagacgagaaagacgctttaatgttcaaagaatcct tgatatcatgtaatttacgtctgagtcagacttatagacaagagatattacatatcgacgaagagacaatggaaaaacaa ccccttttgccaaagagaaaacaataa |
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Protein
| Protein ID | pfu_aug2.0_308.1_27199.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_308.1_27199.t1 MASTSQQSGSHMKEKGNPLAVTGKAKLDRFNERKESLNKRPSTLLVISKWMVTGVFGLLLLFCLSFNKLSIVATGRWHLK KDGDHDPQRIVMLFTIIIIPYAITFLRSVWVTIGRKDLPRPKTSAIIYCIVASLLEVIGITLVACEVIVGEKAYIPVLLM NAVLLLPLSSLTAQNWRNKSWRLILSTIFSLLGTTATIVLLFLGNPDIENTVILLVGIFLVSISWMPWLQEKMMEIKIEQ PIQEIPEEIPKGSFRLEQFAQNNRVTDLRAMQISENNSHWRSLRISSFIKLISTLPAILIYEGISGRNFSNVFSDFKDGW SSSDWSPNVMLLWFFVSNVLTAVLGYMVAVFACRTCMDRGAFVLPLFLSTPLTVALLTVYDPCSVLLDHVDKSTNCGNPT DVKTIALIAASVLCFAVSQALSVGFNAFNGSSIILEKETKLFRFASFNGVFLEQWLLVDKRQDFEGLDRNSQQSQHKKSK VFICTTMYNENQTEMKQLLESVYAVNAAQISGDQTSCHFESHIFLDGSIRDDDLQENALRLLSLLPESLGIVDLRKGTKI ITPYGMAISWKLPTPNGLNGMNFTIHFKDIRKVKNKKRWSQIMYISYVLDFLNKNFKQGTDSSSEDDSFILTTDADVRFE ATDVETLLDLMTRDHTVGAVCARTYPLGSGPLVWYQKFEYAIGHWFQKAAEHVLGSVLCAPGCFSVYRCSALRDIVPIYA TGVKKAFDFLIKDMGEDRWLCTLMVQSGWRIEYCAASQNKTYCPEDFDEFFKQRRRWIASTMANIWKLIAEWSFIHGMNH KVSILFCMYQIFLFASTIVGPSGLVYAWGANLVVTMVLQIIVCLLFSLACIKLKSSQQLMIAKILTFLYSMIMAAVAVGV AIQVANDFENPDTGETDDYPDYPDEPTVSTKKPDAISIHIPYSVTTVYLTALASLFFVTGLLHFKEVINLLYGLIYLLCL PSCYLILLIYTICNITDRSWESKEETEVDILESQEVITETAEVWIPSGSQTLSGKKGTKTIVTRRKPINDGSKSVEEWLK DKKLIEQYAEQFKEHGYENTLFLSGMDEKTLTKKIGVNKLAHKINLMGMIDRIPNFDIDVGVPNNVGTWLDTIGLWMYKT NFEAASIKTPESLEALKDMSKEQLKEELGITKHGHRKRLLIAIDKLRYPTEDEETYLMVRKTVSEIDWKLLKDINKDEHK FWEDLINVCLVPNRDAFGRISELKEGLESLRLHALLGGWAVNCLWMVLALTLSGSAQLTAAGTNPLGLAFLLIFGLIFII QFLCMIVHRLETLAHFIARLPYKLSGHFRQSWTFGEGEESQLDEKDALMFKESLISCNLRLSQTYRQEILHIDEETMEKQ PLLPKRKQ |
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