Gene
| Gene Model ID | pfu_aug2.0_308.1_27203 |
|---|---|
| Locus | scaffold308.1 : 276675 ... 287085 : + |
| To GenomeBrowser | scaffold308.1:276675..287085 |
| Genes list of scaffold | scaffold308.1 |
| Synonym | pfu_aug1.0_53880.1_34550 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_308.1_27203.t1 | 4 | 1 | TPR_11 | 10 | 66 | 5.4e-08 | 32.3 | 1.4e-06 | 0.002 | 17.7 |
| pfu_aug2.0_308.1_27203.t1 | 5 | 1 | TPR_12 | 11 | 66 | 2.5e-18 | 65.7 | 2.3e-08 | 3.4e-05 | 23.6 |
| pfu_aug2.0_308.1_27203.t1 | 7 | 1 | TPR_10 | 32 | 47 | 3.6e-07 | 29.8 | 0.019 | 28.0 | 4.8 |
| pfu_aug2.0_308.1_27203.t1 | 7 | 2 | TPR_10 | 50 | 66 | 3.6e-07 | 29.8 | 0.4 | 590.0 | 0.6 |
| pfu_aug2.0_308.1_27203.t1 | 5 | 2 | TPR_12 | 103 | 130 | 2.5e-18 | 65.7 | 0.011 | 17.0 | 5.4 |
| pfu_aug2.0_308.1_27203.t1 | 4 | 2 | TPR_11 | 104 | 128 | 5.4e-08 | 32.3 | 0.021 | 31.0 | 4.3 |
| pfu_aug2.0_308.1_27203.t1 | 7 | 3 | TPR_10 | 105 | 128 | 3.6e-07 | 29.8 | 0.0011 | 1.7 | 8.7 |
| pfu_aug2.0_308.1_27203.t1 | 4 | 3 | TPR_11 | 156 | 183 | 5.4e-08 | 32.3 | 0.0092 | 14.0 | 5.4 |
| pfu_aug2.0_308.1_27203.t1 | 5 | 3 | TPR_12 | 157 | 187 | 2.5e-18 | 65.7 | 0.00077 | 1.1 | 9.1 |
| pfu_aug2.0_308.1_27203.t1 | 7 | 4 | TPR_10 | 158 | 179 | 3.6e-07 | 29.8 | 0.25 | 380.0 | 1.2 |
| pfu_aug2.0_308.1_27203.t1 | 4 | 4 | TPR_11 | 193 | 252 | 5.4e-08 | 32.3 | 2.4e-05 | 0.035 | 13.7 |
| pfu_aug2.0_308.1_27203.t1 | 5 | 4 | TPR_12 | 194 | 236 | 2.5e-18 | 65.7 | 4.8e-07 | 0.00072 | 19.4 |
| pfu_aug2.0_308.1_27203.t1 | 7 | 5 | TPR_10 | 195 | 209 | 3.6e-07 | 29.8 | 3.3 | 4900.0 | -2.4 |
| pfu_aug2.0_308.1_27203.t1 | 7 | 6 | TPR_10 | 242 | 263 | 3.6e-07 | 29.8 | 1.7e-05 | 0.025 | 14.5 |
| pfu_aug2.0_308.1_27203.t1 | 5 | 5 | TPR_12 | 243 | 282 | 2.5e-18 | 65.7 | 1.1e-06 | 0.0017 | 18.2 |
| pfu_aug2.0_308.1_27203.t1 | 7 | 7 | TPR_10 | 266 | 281 | 3.6e-07 | 29.8 | 1.3 | 1900.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_308.1_27203.t1 | gi|676468508|ref|XP_009058231.1| | hypothetical protein LOTGIDRAFT_233473 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_308.1_27203.t1 | gi|585664567|ref|XP_006812041.1| | PREDICTED: tetratricopeptide repeat protein 23-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_308.1_27203.t1 | gi|260786336|ref|XP_002588214.1| | hypothetical protein BRAFLDRAFT_68857 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_308.1_27203.t1 | gi|390346888|ref|XP_003726651.1| | 0.0 | |
| pfu_aug2.0_308.1_27203.t1 | gi|545195022|ref|XP_001489971.2| | PREDICTED: tetratricopeptide repeat protein 23 isoform X1 [Equus caballus] | 1.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_308.1_27203.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_308.1_27203.t1 atgactcctccagacaagaagctcaaaacagcagagagaaaagctgagaggtttagagaagagaaaaaggctgataaatg tattcatgagcttacaaaatgtctggcactgaacagaatactgtacggagccgaccactggaagctggcaaggagtcatt gtaacctagcagaggcgtatctagaaatgaaaggatattcaccgcaggcagaccaccactcagaaatagctaaaaccata atgttgaactctgtcacaagttataccactgagcaggaaaaggcagatatatatgacgtcctcttcaaaatctaccatac acaaggaagagcattaacaactttgaagaagtacggagaagcagagggtttattagctaaggccgacaaagtttgtgggg aactcagcaagctgtcgtgtttaagtcaggatgatctagatgactatgaaataaaattggcccaggcaactgccagattg tactggaagcagaagaagtatgcagtggctggtagtcagtatgataagctgttaaagctgatagaggagagacatgaaca atctaagggacggtatgccaaccatgagaaagccatagagatgtttctacaagctcattccatagctggagcaaagtacc gtgaggggcatcctgatttagttgacacggctttagccttagctcaggcctactccagtaccgggtcagaggacggggaa agtgcagcagagaaatacttaaatgagtgcttggcatcgtgtcagacgttacacggaccacatcatccgaagacattaca ggtccaagacgaattggcaagactctacatacgcacagacagaagtcaggtcttgtgcatacaaattttatttaaataa |
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Protein
| Protein ID | pfu_aug2.0_308.1_27203.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_308.1_27203.t1 MTPPDKKLKTAERKAERFREEKKADKCIHELTKCLALNRILYGADHWKLARSHCNLAEAYLEMKGYSPQADHHSEIAKTI MLNSVTSYTTEQEKADIYDVLFKIYHTQGRALTTLKKYGEAEGLLAKADKVCGELSKLSCLSQDDLDDYEIKLAQATARL YWKQKKYAVAGSQYDKLLKLIEERHEQSKGRYANHEKAIEMFLQAHSIAGAKYREGHPDLVDTALALAQAYSSTGSEDGE SAAEKYLNECLASCQTLHGPHHPKTLQVQDELARLYIRTDRSQVLCIQILFK |
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