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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_308.1_27210
Locus scaffold308.1 : 353333 ... 366115 : -
To GenomeBrowser scaffold308.1:353333..366115
Genes list of scaffold scaffold308.1
Synonym pfu_aug1.0_8199.1_67820

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_308.1_27210.t1 21 1 zf-H2C2_2 2 29 4.6e-10 39.2 0.11 210.0 2.5
pfu_aug2.0_308.1_27210.t1 20 1 zf-C2H2 20 42 3.1e-26 90.0 0.15 280.0 2.1
pfu_aug2.0_308.1_27210.t1 20 1 zf-C2H2_6 20 43 8.3e-07 28.7 4.5e-06 0.0084 15.9
pfu_aug2.0_308.1_27210.t1 21 1 zf-C2H2_4 21 37 4.6e-12 45.3 1.0 1900.0 -0.4
pfu_aug2.0_308.1_27210.t1 21 2 zf-H2C2_2 34 69 4.6e-10 39.2 0.00081 1.5 9.2
pfu_aug2.0_308.1_27210.t1 20 2 zf-C2H2 60 82 3.1e-26 90.0 0.037 69.0 4.0
pfu_aug2.0_308.1_27210.t1 20 2 zf-C2H2_6 60 84 8.3e-07 28.7 1.1e-06 0.002 17.9
pfu_aug2.0_308.1_27210.t1 21 2 zf-C2H2_4 61 77 4.6e-12 45.3 0.059 110.0 3.4
pfu_aug2.0_308.1_27210.t1 21 3 zf-H2C2_2 74 112 4.6e-10 39.2 0.016 29.0 5.1
pfu_aug2.0_308.1_27210.t1 20 3 zf-C2H2 103 125 3.1e-26 90.0 0.011 21.0 5.7
pfu_aug2.0_308.1_27210.t1 21 3 zf-C2H2_4 103 117 4.6e-12 45.3 1.3 2300.0 -0.7
pfu_aug2.0_308.1_27210.t1 20 3 zf-C2H2_6 104 112 8.3e-07 28.7 0.18 330.0 1.3
pfu_aug2.0_308.1_27210.t1 21 4 zf-C2H2_4 150 172 4.6e-12 45.3 0.00032 0.59 10.5
pfu_aug2.0_308.1_27210.t1 21 4 zf-H2C2_2 150 159 4.6e-10 39.2 0.028 52.0 4.3
pfu_aug2.0_308.1_27210.t1 20 4 zf-C2H2_6 150 172 8.3e-07 28.7 0.00024 0.45 10.4
pfu_aug2.0_308.1_27210.t1 20 4 zf-C2H2 151 172 3.1e-26 90.0 1.3e-05 0.025 14.9
pfu_aug2.0_308.1_27210.t1 21 5 zf-H2C2_2 163 173 4.6e-10 39.2 2.9 5300.0 -2.0
pfu_aug2.0_308.1_27210.t1 20 5 zf-C2H2 277 298 3.1e-26 90.0 2.2e-05 0.041 14.2
pfu_aug2.0_308.1_27210.t1 21 5 zf-C2H2_4 277 298 4.6e-12 45.3 6.4e-05 0.12 12.7
pfu_aug2.0_308.1_27210.t1 21 6 zf-H2C2_2 277 287 4.6e-10 39.2 2.2 4100.0 -1.7
pfu_aug2.0_308.1_27210.t1 20 5 zf-C2H2_6 277 298 8.3e-07 28.7 0.0059 11.0 6.0
pfu_aug2.0_308.1_27210.t1 21 7 zf-H2C2_2 293 314 4.6e-10 39.2 0.0014 2.6 8.5
pfu_aug2.0_308.1_27210.t1 20 6 zf-C2H2 303 325 3.1e-26 90.0 1.9e-05 0.035 14.4
pfu_aug2.0_308.1_27210.t1 21 6 zf-C2H2_4 303 325 4.6e-12 45.3 0.00014 0.26 11.6
pfu_aug2.0_308.1_27210.t1 20 6 zf-C2H2_6 303 310 8.3e-07 28.7 0.03 56.0 3.8
pfu_aug2.0_308.1_27210.t1 21 8 zf-H2C2_2 318 337 4.6e-10 39.2 0.00077 1.4 9.3
pfu_aug2.0_308.1_27210.t1 20 7 zf-C2H2_6 320 327 8.3e-07 28.7 2.8 5200.0 -2.4
pfu_aug2.0_308.1_27210.t1 20 7 zf-C2H2 330 352 3.1e-26 90.0 0.005 9.2 6.8
pfu_aug2.0_308.1_27210.t1 21 7 zf-C2H2_4 330 352 4.6e-12 45.3 0.0002 0.38 11.2
pfu_aug2.0_308.1_27210.t1 20 8 zf-C2H2_6 330 344 8.3e-07 28.7 0.19 360.0 1.2
pfu_aug2.0_308.1_27210.t1 21 9 zf-H2C2_2 343 364 4.6e-10 39.2 0.21 400.0 1.6
pfu_aug2.0_308.1_27210.t1 20 9 zf-C2H2_6 356 365 8.3e-07 28.7 0.17 320.0 1.4
pfu_aug2.0_308.1_27210.t1 20 8 zf-C2H2 357 367 3.1e-26 90.0 1.6 2900.0 -1.1
pfu_aug2.0_308.1_27210.t1 21 8 zf-C2H2_4 357 373 4.6e-12 45.3 8.0 15000.0 -4.1
pfu_aug2.0_308.1_27210.t1 20 9 zf-C2H2 384 405 3.1e-26 90.0 0.0046 8.5 6.9
pfu_aug2.0_308.1_27210.t1 21 9 zf-C2H2_4 384 405 4.6e-12 45.3 1.3 2500.0 -0.8
pfu_aug2.0_308.1_27210.t1 21 10 zf-H2C2_2 401 429 4.6e-10 39.2 0.24 440.0 1.4
pfu_aug2.0_308.1_27210.t1 20 10 zf-C2H2 420 442 3.1e-26 90.0 0.00013 0.24 11.7
pfu_aug2.0_308.1_27210.t1 21 10 zf-C2H2_4 420 442 4.6e-12 45.3 0.00022 0.41 11.0
pfu_aug2.0_308.1_27210.t1 20 10 zf-C2H2_6 420 430 8.3e-07 28.7 0.044 82.0 3.3
pfu_aug2.0_308.1_27210.t1 20 11 zf-C2H2_6 460 470 8.3e-07 28.7 0.012 23.0 5.0
pfu_aug2.0_308.1_27210.t1 21 11 zf-H2C2_2 461 472 4.6e-10 39.2 0.11 200.0 2.5
pfu_aug2.0_308.1_27210.t1 20 11 zf-C2H2 462 483 3.1e-26 90.0 0.00037 0.68 10.4
pfu_aug2.0_308.1_27210.t1 21 11 zf-C2H2_4 462 483 4.6e-12 45.3 0.0011 2.0 8.9
pfu_aug2.0_308.1_27210.t1 21 12 zf-H2C2_2 479 499 4.6e-10 39.2 0.0012 2.3 8.6
pfu_aug2.0_308.1_27210.t1 20 12 zf-C2H2_6 487 499 8.3e-07 28.7 0.00048 0.88 9.5
pfu_aug2.0_308.1_27210.t1 20 12 zf-C2H2 488 510 3.1e-26 90.0 0.00031 0.58 10.6
pfu_aug2.0_308.1_27210.t1 21 12 zf-C2H2_4 488 508 4.6e-12 45.3 0.0047 8.8 6.9
pfu_aug2.0_308.1_27210.t1 21 13 zf-H2C2_2 503 529 4.6e-10 39.2 1.8e-05 0.034 14.4
pfu_aug2.0_308.1_27210.t1 20 13 zf-C2H2_6 518 533 8.3e-07 28.7 0.00012 0.23 11.4
pfu_aug2.0_308.1_27210.t1 20 13 zf-C2H2 519 541 3.1e-26 90.0 9.6e-05 0.18 12.2
pfu_aug2.0_308.1_27210.t1 21 13 zf-C2H2_4 519 541 4.6e-12 45.3 0.00079 1.5 9.3
pfu_aug2.0_308.1_27210.t1 21 14 zf-H2C2_2 533 556 4.6e-10 39.2 0.00016 0.29 11.5
pfu_aug2.0_308.1_27210.t1 20 14 zf-C2H2 547 569 3.1e-26 90.0 5.4e-08 0.0001 22.4
pfu_aug2.0_308.1_27210.t1 21 14 zf-C2H2_4 547 570 4.6e-12 45.3 5.1e-06 0.0094 16.2
pfu_aug2.0_308.1_27210.t1 20 14 zf-C2H2_6 547 569 8.3e-07 28.7 0.0013 2.4 8.2
pfu_aug2.0_308.1_27210.t1 21 15 zf-H2C2_2 561 584 4.6e-10 39.2 0.00039 0.73 10.2
pfu_aug2.0_308.1_27210.t1 21 15 zf-C2H2_4 577 597 4.6e-12 45.3 0.0027 5.0 7.6
pfu_aug2.0_308.1_27210.t1 20 15 zf-C2H2 578 597 3.1e-26 90.0 0.00047 0.87 10.0
pfu_aug2.0_308.1_27210.t1 20 15 zf-C2H2_6 579 597 8.3e-07 28.7 1.6 3000.0 -1.7
pfu_aug2.0_308.1_27210.t1 21 16 zf-H2C2_2 596 620 4.6e-10 39.2 0.00047 0.88 9.9
pfu_aug2.0_308.1_27210.t1 20 16 zf-C2H2_6 608 620 8.3e-07 28.7 0.013 24.0 5.0
pfu_aug2.0_308.1_27210.t1 20 16 zf-C2H2 609 631 3.1e-26 90.0 0.00083 1.5 9.2
pfu_aug2.0_308.1_27210.t1 21 16 zf-C2H2_4 609 627 4.6e-12 45.3 0.0071 13.0 6.3
pfu_aug2.0_308.1_27210.t1 21 17 zf-H2C2_2 624 648 4.6e-10 39.2 4.7e-06 0.0088 16.2
pfu_aug2.0_308.1_27210.t1 20 17 zf-C2H2_6 636 649 8.3e-07 28.7 0.093 170.0 2.2
pfu_aug2.0_308.1_27210.t1 20 17 zf-C2H2 637 660 3.1e-26 90.0 3.7e-05 0.069 13.5
pfu_aug2.0_308.1_27210.t1 21 17 zf-C2H2_4 637 660 4.6e-12 45.3 4.1e-05 0.076 13.3
pfu_aug2.0_308.1_27210.t1 21 18 zf-H2C2_2 652 674 4.6e-10 39.2 0.0003 0.55 10.6
pfu_aug2.0_308.1_27210.t1 20 18 zf-C2H2 666 690 3.1e-26 90.0 0.0068 13.0 6.4
pfu_aug2.0_308.1_27210.t1 21 18 zf-C2H2_4 666 687 4.6e-12 45.3 0.0098 18.0 5.9
pfu_aug2.0_308.1_27210.t1 20 18 zf-C2H2_6 666 672 8.3e-07 28.7 0.53 980.0 -0.2
pfu_aug2.0_308.1_27210.t1 21 19 zf-H2C2_2 742 755 4.6e-10 39.2 0.07 130.0 3.1
pfu_aug2.0_308.1_27210.t1 20 19 zf-C2H2 747 768 3.1e-26 90.0 0.0014 2.7 8.5
pfu_aug2.0_308.1_27210.t1 21 19 zf-C2H2_4 747 768 4.6e-12 45.3 0.0056 10.0 6.6
pfu_aug2.0_308.1_27210.t1 20 19 zf-C2H2_6 747 765 8.3e-07 28.7 0.059 110.0 2.9
pfu_aug2.0_308.1_27210.t1 21 20 zf-H2C2_2 763 780 4.6e-10 39.2 0.36 680.0 0.8
pfu_aug2.0_308.1_27210.t1 21 20 zf-C2H2_4 770 789 4.6e-12 45.3 0.0018 3.4 8.2
pfu_aug2.0_308.1_27210.t1 20 20 zf-C2H2_6 770 780 8.3e-07 28.7 0.077 140.0 2.5
pfu_aug2.0_308.1_27210.t1 20 20 zf-C2H2 771 789 3.1e-26 90.0 0.00011 0.21 12.0
pfu_aug2.0_308.1_27210.t1 21 21 zf-H2C2_2 786 793 4.6e-10 39.2 8.0 15000.0 -4.1
pfu_aug2.0_308.1_27210.t1 21 21 zf-C2H2_4 848 858 4.6e-12 45.3 6.4 12000.0 -2.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_308.1_27210.t1 gi|507697407|ref|XP_004714453.1| 1.0e-37
pfu_aug2.0_308.1_27210.t1 gi|731512697|ref|XP_010599541.1| PREDICTED: zinc finger protein 14 [Loxodonta africana] 6.0e-37
pfu_aug2.0_308.1_27210.t1 gi|664780103|ref|XP_008509369.1| PREDICTED: zinc finger protein 850-like isoform X1 [Equus przewalskii] 2.0e-34

Transcript
Transcript IDpfu_aug2.0_308.1_27210.t1
Definition-
>pfu_aug2.0_308.1_27210.t1
aaacatcacgtgaggaaggactatgacgaggaggaagaggagagggaagtgatcatcacatgtctgtcatgtgatcagac
atttgacagttatagagcattcagtgaacataatgataagaaacatcacgtgaggaaggactatgacgaggaggaagagg
agagagaagtgattatcacatgtcagtcatgtgatcagacatttgacagttatagagcattcagtgaacataatgataag
gagcatcatgggaaggggcaaaagtctgtgaagagtttgatgtggattaaaaagcaaaaaacgtgtcattgttcagagtg
caacttgacatttggaaaacctgaattccttctaaaacatgggaaagtggcacacttccatgtaaattcttctgggaaag
aagagtctccagtgacaccctctattcctactaaagatgggattccttattgtgagaagtgtgatcgaacattcgccaga
aaactcaactaccttcagcacatgagacatgtacacaacacctgtaagacaagtagcactcctaaacccaaatcaaagcc
gtcagtaaaggtaaagaccgagaatatggaagacacagatagtctggctatggttgatgatgagcagaatgacccagatt
tcactgttaatgatcacgaaaatgatccagattccaatcccgaggcggaaaacttccacgctaccgtagacaataaatca
aagaataagaggtcatcaaaccaacaaaagtattactcagaggaggatttcaaagcctgctctgttaagctaaaggactt
tggagatagagtagatttggagaaaatgaggtgtaagatttgctatagaatgtttaaaagtcctgtgcgtttattccaac
atatggaaaatcatgatagccctgcacacgaatgtagtgtatgtggaaaaaagtgtgcaacacccttcagactaaaagag
catatgaggaagcattcacaggggctgccatgcaagttctgtaacggtacttatatgcaccaacggaatcttaaccggca
ctatgtcaaagtgcacaagatgaaacactgcaaacagtgcaaagaaatatttccgctttcaaaaatggctgagcactttg
catcttgcagaccaaaagagggcatgataagatgcagaatatgttggcagatcttcaaggataagaatactcatcaggca
cacatggaaagacatcgacaaagatcggaaaaaaccaatataaaaagagcaattattatctgtaagatttgtaaatccaa
gtttgaatctaaagagatgctgattaatcatgtgatcacctcccaccctgatcgtatggagtcctaccccatgcaaacag
gacgttccagtgacggtattctgaaatgcaagtcctgctacaaagaattttattcaaaagaatcttttgctttacaccag
gccagtcatatagaaaaggtacacaaatgtgaaacttgccgagccagattctcaagcacatattccctgaagttacattc
caagatacacctaaaacctggccaggctgtcctccatgagtgtaaagtgtgccacaagacattcctacgacccaattcct
tatccattcacatgtttgcacatcggtctaccaaagatttctcctgcagtgaatgtgggaagtcattcaggttaaaagcc
tctttaaggtcacatctgcgagtccacaacaaattctttttctacatctgtaaatgtggtgagaagtttcgttccaaatc
tacattcagaaatcatattgtggcctaccatagagaagacaaaacagtaacaaatttccccatttataaatgtgaatatt
gtcagaaggaatttgtatcaaaacaccggtacatggagcatacgagtttccatacaggtagaaaaacgttttcatgctct
ctgtgcagttccaaatttgccacacaaggcaaattaaactggcatattaacagagtgcatatgacaaagaagaaattcat
atgcaaagtatgtgacctttcaagtgaaaacgagacaaaatttaagaagcatttacaaacaatcacacatattgaggaat
gcaaggcagccaatattgagttgaagcagttctatgatgaccttgaagtgttagaaaaaggaagtgaactctccgaacca
agagtcacctttgatgtcatctacgagtcgtcagaaaatggaaaggaaagaaaggaaataaatgtaaaaaggaaagactg
ctcaatttgtaaaaagaagtttatcactgtgaaggcattacacaaccataggagggacaaacatacacattgttctgttt
gtaacgaaaattttaagtctcctatgtcattccagaaacatataggcagaaaatcacacatggaaacttgcaagaataag
ggaattgatccagaggcatttctgttctgtttcaaatcagacggtatacttgaggaaggtgagcagcctgaggaggacac
cgattttgaaagtctgacagcaataggaggtatagatggttcaaaaatatcaaatgatgtaactcaactcatggaccatc
aatatcagacccacgagggaataactcaaagtacaacagagttgtcacaaaatctccagggaacatctcaaaacaataca
agtctaagaagtattttaccatcaaatcaaccaaaatcccaaggcacatcagctacaaacttgaaggtacaatctccaaa
tgtaaaggttataactgtaggtaaccagcttgcatcgcctcgtagtttactcaaaacatcccacaataagaatgtaacaa
ctataaacatccaaggaacatcaggaaatgtccaggtacaaaagacacctcagancgagggaataactcaaagtacaaca
gagttgtcacaaaatctccagggaacatctcaaaacaatacaagtctaagaagtattttaccatcaaatcaaccaaaatc
ccaaggcacatcagctacaaacttgaaggtacaatctccaaatgtaaaggttataactgtaggtaaccagcttgcatcgc
ctcgtagtttactcaaaacatcccacaataagaatgtaacaactataaacatccaaggaacatcaggaaatgtccaggta
caaaagacacctcagaggttaactggaaatcctggaaaacaacaagtagtatctcagagcctgctaggggcatctcagac
tcccatagtggcatctcaaagccttcaagggtcatctcacagccagcaattgacatctcaaactcaaagccaacaattga
catctcacagccttcttggagcatctcagattcctggaacaggacaaggggaaggtccccttattattgcagagggctta
caggaggttgagaactacgtcattgaggactcggcagttatagccgaggctcagcaagctgtggaggtgcttggttctat
gaatgacgataacatggaatatgtccttataacaattcctaatgattcactcacagtaagggaggatggaacatacctat
taaacgacaccatccttggtgacgtactaaagtaa

Protein
Protein IDpfu_aug2.0_308.1_27210.t1
Definition-
>pfu_aug2.0_308.1_27210.t1
KHHVRKDYDEEEEEREVIITCLSCDQTFDSYRAFSEHNDKKHHVRKDYDEEEEEREVIITCQSCDQTFDSYRAFSEHNDK
EHHGKGQKSVKSLMWIKKQKTCHCSECNLTFGKPEFLLKHGKVAHFHVNSSGKEESPVTPSIPTKDGIPYCEKCDRTFAR
KLNYLQHMRHVHNTCKTSSTPKPKSKPSVKVKTENMEDTDSLAMVDDEQNDPDFTVNDHENDPDSNPEAENFHATVDNKS
KNKRSSNQQKYYSEEDFKACSVKLKDFGDRVDLEKMRCKICYRMFKSPVRLFQHMENHDSPAHECSVCGKKCATPFRLKE
HMRKHSQGLPCKFCNGTYMHQRNLNRHYVKVHKMKHCKQCKEIFPLSKMAEHFASCRPKEGMIRCRICWQIFKDKNTHQA
HMERHRQRSEKTNIKRAIIICKICKSKFESKEMLINHVITSHPDRMESYPMQTGRSSDGILKCKSCYKEFYSKESFALHQ
ASHIEKVHKCETCRARFSSTYSLKLHSKIHLKPGQAVLHECKVCHKTFLRPNSLSIHMFAHRSTKDFSCSECGKSFRLKA
SLRSHLRVHNKFFFYICKCGEKFRSKSTFRNHIVAYHREDKTVTNFPIYKCEYCQKEFVSKHRYMEHTSFHTGRKTFSCS
LCSSKFATQGKLNWHINRVHMTKKKFICKVCDLSSENETKFKKHLQTITHIEECKAANIELKQFYDDLEVLEKGSELSEP
RVTFDVIYESSENGKERKEINVKRKDCSICKKKFITVKALHNHRRDKHTHCSVCNENFKSPMSFQKHIGRKSHMETCKNK
GIDPEAFLFCFKSDGILEEGEQPEEDTDFESLTAIGGIDGSKISNDVTQLMDHQYQTHEGITQSTTELSQNLQGTSQNNT
SLRSILPSNQPKSQGTSATNLKVQSPNVKVITVGNQLASPRSLLKTSHNKNVTTINIQGTSGNVQVQKTPQXEGITQSTT
ELSQNLQGTSQNNTSLRSILPSNQPKSQGTSATNLKVQSPNVKVITVGNQLASPRSLLKTSHNKNVTTINIQGTSGNVQV
QKTPQRLTGNPGKQQVVSQSLLGASQTPIVASQSLQGSSHSQQLTSQTQSQQLTSHSLLGASQIPGTGQGEGPLIIAEGL
QEVENYVIEDSAVIAEAQQAVEVLGSMNDDNMEYVLITIPNDSLTVREDGTYLLNDTILGDVLK

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Okinawa Institute of Science and Technology
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