Gene
| Gene Model ID | pfu_aug2.0_3082.1_09058 |
|---|---|
| Locus | scaffold3082.1 : 10636 ... 49470 : + |
| To GenomeBrowser | scaffold3082.1:10636..49470 |
| Genes list of scaffold | scaffold3082.1 |
| Synonym | pfu_aug1.0_8897.1_53252 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| d-2-hydroxyglutarate mitochondrial | GO:0008762 GO:0050660 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3082.1_09058.t1 | 2 | 1 | FAD-oxidase_C | 26 | 64 | 0.0 | 182.9 | 0.78 | 2900.0 | -2.7 |
| pfu_aug2.0_3082.1_09058.t1 | 1 | 1 | wnt | 46 | 324 | 0.0 | 355.1 | 0.0 | 0.0 | 354.6 |
| pfu_aug2.0_3082.1_09058.t1 | 1 | 1 | FAD_binding_4 | 394 | 531 | 9.4e-35 | 119.1 | 4.2e-38 | 1.6e-34 | 118.3 |
| pfu_aug2.0_3082.1_09058.t1 | 2 | 2 | FAD-oxidase_C | 568 | 809 | 0.0 | 182.9 | 0.0 | 0.0 | 181.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3082.1_09058.t1 | gi|676467822|ref|XP_009058012.1| | hypothetical protein LOTGIDRAFT_182587 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_3082.1_09058.t1 | gi|524910985|ref|XP_005110364.1| | PREDICTED: d-2-hydroxyglutarate dehydrogenase, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_3082.1_09058.t1 | gi|291225777|ref|XP_002732875.1| | PREDICTED: d-2-hydroxyglutarate dehydrogenase, mitochondrial-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_3082.1_09058.t1 | gi|260791202|ref|XP_002590629.1| | hypothetical protein BRAFLDRAFT_59307 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_3082.1_09058.t1 | gi|224059744|ref|XP_002191768.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3082.1_09058.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3082.1_09058.t1 atgaatcgttttgacgttttatctgctttaataggagtttttgtgattttacagtttacagattttgcagatagtattcg ctggttgtctttggccaaaatgtccagcgtatctacgatagaaactccacaaacttgtgattccttagtgggactcgtca aaagacagaagaaaatatgtaagaagaatttagaagttatgcacagtgtgaaattaggcgctcttaacgccatagaagaa tgctcattccagtttaaaaatagaagatggaactgcagtacggtggaggctagaactatttttggaaatgtactcaaatt aggaacaagagaggcgtcatttgtacacgcaatttccgctgccggtgttgcgcacgcagtgacaagagcgtgttcgagcg gcaaacttacaaagtgtggctgtgataggactattcgcggacccagtaaagacgggttcgagtggtccgggtgttcggac aatatagcatatgggactgctttttctaaagcttttgtcgatgccagagacagaagaagaagtagaaacaataaaaatgc tggtagaaaattaatgaatttacataacaacgaagcaggtcgaaaggccatagaagacaatatgaaagtagactgtaaat gtcacggtgtttccggaagttgtgagttaaggacatgttggcgggcaatgccgagattccgggaggtcggcgttattatc aaagaaaagtttgatggcgcgacggaagtgaaactagaaaagacaaaatccataccgaggctagttccggttaacccaca gtttaagcctcatactaaatctgacttagtttatatggtggcctcaccagatttctgtgaacctgacgaaaagacaggat ccaagggaacgaaaggccgtgtatgtaacaagacatctaaagctatagatggctgtgacttaatgtgctgtggtcgggga gccaattttacagttgaacttacaagtgttaggtatccagacttgaagagaggaggttatgccacagttactgaccggga tatttccgattttgagaagcttttgccggagaatggccgagttttaactgacgcatcagagctctcggggtacaacacag actggctgaaaacttgtagaggctttatttaccagtgtacaaatattacaggtaacagtcaagttgttcttagaccaaaa accacagaagaagtgtctggcataatgaagatttgcaatgagagaaagttagctgtggtaccacagggaggaaatacagg gttggtgggaggcagtgttcctgtgttcgatgaggttgtcctctctacacagttgatgaataacatcataagtctggatg aagtctcaggtacactaacatgtcaagcaggttgtgtattaggtgctatagaggaatatgtctctgattacaacttgacc attcctattgatctcggtgcaaaaggaagctgccatattggtggtaacctagcaaccaatgctggaggactcaggttgct aagatacgggtctttacatggcagtgtgcttggtgttgaggcagtacttgcaaatggtgacattttggactgcttgacat cgttaaggaaagataacacaggatatgatttaaaacagctatttataggatcagagggaaccctgggagtaatcactgcc gcctcaatcatctgtcctcagaaaccacaagccgtctctgtagcattcctaggatgtgagagttttccaagcattctaca gatatttaaacaatccaagaacatgttaggagagatcctgtcggcttatgagtttatagattctcagtcaatgtcctgtg ccaaagaaaaccttaagttatccagtcctataggagatttcccattctacgtccttattgaaacctcaggttcaaatggg cagcacgatgaagagaagttgaatcaattcctagaggagatgatgagtttgggactggtgaatgatgggacagtggccac agagtctactaagattaagaatatatggggtctcagagagaggcttgccgaaggactgctgcatgatgggtattgttaca aatatgatgtttctcttcccctaccacatttctatggtctggtggaggccatgagggaacgacttggggattctgtcaaa cgtgtgatagggtatggacatgttggagacggtaacctccacttaaacgtcaccagtaaggagtataaccaggagatcat ggaccagatagaaccgtttgtttatgactgggtggcagaacgtcggggcagcgtcagtgccgaacacggactgggattca aaaaacgagactttatttatcatagtaaatcaaagtctgctgtgcaattgatgcagatgatgaaaaattcactcgaccca aacggaattttgaatccatataaagtgctgccctctacattacgttag |
|
Protein
| Protein ID | pfu_aug2.0_3082.1_09058.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3082.1_09058.t1 MNRFDVLSALIGVFVILQFTDFADSIRWLSLAKMSSVSTIETPQTCDSLVGLVKRQKKICKKNLEVMHSVKLGALNAIEE CSFQFKNRRWNCSTVEARTIFGNVLKLGTREASFVHAISAAGVAHAVTRACSSGKLTKCGCDRTIRGPSKDGFEWSGCSD NIAYGTAFSKAFVDARDRRRSRNNKNAGRKLMNLHNNEAGRKAIEDNMKVDCKCHGVSGSCELRTCWRAMPRFREVGVII KEKFDGATEVKLEKTKSIPRLVPVNPQFKPHTKSDLVYMVASPDFCEPDEKTGSKGTKGRVCNKTSKAIDGCDLMCCGRG ANFTVELTSVRYPDLKRGGYATVTDRDISDFEKLLPENGRVLTDASELSGYNTDWLKTCRGFIYQCTNITGNSQVVLRPK TTEEVSGIMKICNERKLAVVPQGGNTGLVGGSVPVFDEVVLSTQLMNNIISLDEVSGTLTCQAGCVLGAIEEYVSDYNLT IPIDLGAKGSCHIGGNLATNAGGLRLLRYGSLHGSVLGVEAVLANGDILDCLTSLRKDNTGYDLKQLFIGSEGTLGVITA ASIICPQKPQAVSVAFLGCESFPSILQIFKQSKNMLGEILSAYEFIDSQSMSCAKENLKLSSPIGDFPFYVLIETSGSNG QHDEEKLNQFLEEMMSLGLVNDGTVATESTKIKNIWGLRERLAEGLLHDGYCYKYDVSLPLPHFYGLVEAMRERLGDSVK RVIGYGHVGDGNLHLNVTSKEYNQEIMDQIEPFVYDWVAERRGSVSAEHGLGFKKRDFIYHSKSKSAVQLMQMMKNSLDP NGILNPYKVLPSTLR |
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