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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3091.1_05747
Locus scaffold3091.1 : 24186 ... 46223 : +
To GenomeBrowser scaffold3091.1:24186..46223
Genes list of scaffold scaffold3091.1
Synonym pfu_aug1.0_10463.1_10146

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_3091.1_05747.t1 2 1 SEA 40 121 1.2e-07 31.3 9.6e-11 2.4e-07 30.4
pfu_aug2.0_3091.1_05747.t1 2 2 SEA 190 234 1.2e-07 31.3 0.71 1800.0 -1.4

Transcript
Transcript IDpfu_aug2.0_3091.1_05747.t1
Definition-
>pfu_aug2.0_3091.1_05747.t1
atgtatcgtgatacatatcgtcaagctactgtatcgcgatacgagtacaaacgatatatccttacaccactacagaacgc
caattttactggagctccaggcgtatttgatactcacatttcgctggacatatcctttgagccagagtggagcaacctca
aatcaaattcatacagaaactttaagaaagaaatagagaatgaggttgatagtttgtacagatctagtgagttaaaagat
gtctttgaaagaagtgaattgtacagcgtcagagccactggatggattttaattaaacttggtaagaacgaagtacttat
agtcccctacaagtgttgttgtgtttcgtctggatccgccaacagttggcgctaccacaggcaaaagaatgggagtacag
aatgtgattttaatatatacgtcattaccacaaaatttcaacgggagaataacctaggtcagatgaagacagtagacgtc
gatggattctttatagccatagccgctgtcacaaaaattctggaagcaaagaagctgcctgattcagatcttaaaaagcc
acgactacttgtacaagccgataccagcacaataactagttccaaaatatcaggtacaactacacaaatgatgacgaccg
aagtcgagaaaacgactgaagaagtaacggcggagaacaaaactacaccagatacaattaataattctaccgaggaaacc
tctacccaagggactacgaatgacgagactattatgcaagaggagacaactacagaagcttcatcgtcagatggcaataa
tggtatctctgagctgttcactgacaaggcattattcataggtgctgctgcaggggttgttatactgattgtaccaataa
tcgttattgtaattgttgtgaaactgaggaacagtgcaaaaatgaaaaggcaagattcaggctccaataagacaggggat
tctggttcctctggcagcaatgattctacctatgaagatgcaaatagtatgaaaggcttcatgcacaatcctaacatgtt
tcgacagaactaccgcataccgcgggcatctctatctacttcatcgaaaacaggaccgtataattatatctactaa

Protein
Protein IDpfu_aug2.0_3091.1_05747.t1
Definition-
>pfu_aug2.0_3091.1_05747.t1
MYRDTYRQATVSRYEYKRYILTPLQNANFTGAPGVFDTHISLDISFEPEWSNLKSNSYRNFKKEIENEVDSLYRSSELKD
VFERSELYSVRATGWILIKLGKNEVLIVPYKCCCVSSGSANSWRYHRQKNGSTECDFNIYVITTKFQRENNLGQMKTVDV
DGFFIAIAAVTKILEAKKLPDSDLKKPRLLVQADTSTITSSKISGTTTQMMTTEVEKTTEEVTAENKTTPDTINNSTEET
STQGTTNDETIMQEETTTEASSSDGNNGISELFTDKALFIGAAAGVVILIVPIIVIVIVVKLRNSAKMKRQDSGSNKTGD
SGSSGSNDSTYEDANSMKGFMHNPNMFRQNYRIPRASLSTSSKTGPYNYIY

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