Gene
| Gene Model ID | pfu_aug2.0_31.1_03451 |
|---|---|
| Locus | scaffold31.1 : 88387 ... 107945 : - |
| To GenomeBrowser | scaffold31.1:88387..107945 |
| Genes list of scaffold | scaffold31.1 |
| Synonym | pfu_aug1.0_13221.1_03334 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_31.1_03451.t1 | 1 | 1 | DUF1042 | 4 | 142 | 3.6e-26 | 91.6 | 1.1e-29 | 5.4e-26 | 91.0 |
| pfu_aug2.0_31.1_03451.t1 | 1 | 1 | CAMSAP_CH | 5 | 64 | 3.2e-12 | 45.9 | 2.0e-15 | 9.7e-12 | 44.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_31.1_03451.t1 | gi|524913376|ref|XP_005111519.1| | PREDICTED: spermatogenesis-associated protein 4-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_31.1_03451.t1 | gi|524913378|ref|XP_005111520.1| | PREDICTED: spermatogenesis-associated protein 4-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_31.1_03451.t1 | gi|676482122|ref|XP_009062596.1| | hypothetical protein LOTGIDRAFT_76788, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_31.1_03451.t1 | gi|76253826|ref|NP_001029005.1| | spermatogenesis associated 4 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_31.1_03451.t1 | gi|699249689|ref|XP_009860701.1| | PREDICTED: spermatogenesis associated 4 isoform X1 [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_31.1_03451.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_31.1_03451.t1 atgtgtactcagagggatctgaccaatggctatttggtggcagagatattttcctggtatttccctcaagacatacagat gcactcctacaacaatggcacatcattagactcaaaactcaaaaactggagtctcctcaaattgttcatcaaacggcata aactagaaatccctgatgaattggtggaagggacgatacattgtaaggaaggagctgcggcattgctatgtgagaagata tatgagatgctgaccaacagaaagtgggtatctgtaagttctaaaaaagtacctccagaatatgagcccgatttcactga ccgggcatatcagaatcagttgcccatgcatgctcgttcaacagcctcaaagtccattaaaaacaacctcagaattacag aaaccatggcagaccctaaccttatactcagcgctcaaaagtcccaaaagataatcaacgaccacattcagcatcgccaa caagagcgggcagaaaaccccgcccgttttaacgtcaagcccaccctgggcgagagatgtctccgacgcccacctcccac gccagggcaaaccacctttgataaagatagtactcaacacacacttggtgtggacccaagtcagctccccgggggagaag ataatccgctcccacttcccatatcaagagaacagagtgtgcaattcaaagaggtccaagtaaaccaattagacaagact gctatgtacaatatgccagtacaaggctgttga |
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Protein
| Protein ID | pfu_aug2.0_31.1_03451.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_31.1_03451.t1 MCTQRDLTNGYLVAEIFSWYFPQDIQMHSYNNGTSLDSKLKNWSLLKLFIKRHKLEIPDELVEGTIHCKEGAAALLCEKI YEMLTNRKWVSVSSKKVPPEYEPDFTDRAYQNQLPMHARSTASKSIKNNLRITETMADPNLILSAQKSQKIINDHIQHRQ QERAENPARFNVKPTLGERCLRRPPPTPGQTTFDKDSTQHTLGVDPSQLPGGEDNPLPLPISREQSVQFKEVQVNQLDKT AMYNMPVQGC |
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