Gene
| Gene Model ID | pfu_aug2.0_31.1_03456 |
|---|---|
| Locus | scaffold31.1 : 205158 ... 226776 : - |
| To GenomeBrowser | scaffold31.1:205158..226776 |
| Genes list of scaffold | scaffold31.1 |
| Synonym | pfu_aug1.0_14277.1_54047 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pab-dependent poly -specific ribonuclease subunit pan3 isoform x4 | GO:0000289 GO:0000290 GO:0000932 GO:0004535 GO:0005515 GO:0005524 GO:0005829 GO:0006605 GO:0010606 GO:0016772 GO:0031251 GO:0046872 GO:0090503 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_31.1_03456.t1 | gi|676459867|ref|XP_009055438.1| | hypothetical protein LOTGIDRAFT_209346 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_31.1_03456.t1 | gi|585687530|ref|XP_006820509.1| | PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_31.1_03456.t1 | gi|632965251|ref|XP_007898797.1| | PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_31.1_03456.t1 | gi|632965249|ref|XP_007898796.1| | PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_31.1_03456.t1 | gi|556967803|ref|XP_005993020.1| | PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_31.1_03456.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_31.1_03456.t1 atgagtgactctatgggtgacaatggtgaccagttctttaatgccacttttgggacggagactatcccagaatttccatt taacagacctccacttgggcgtcctcagcgggctatgggcgggcctgtgatgggctctggcatgcccgggcaaggccagg gtttccctgatacccagaggatggacatgcatggacaacttgaccctcgtatggataacctaccccctggggctccaggt atgaggatggatgggtatggtcagaggatggggagccccacccaccgtatggacggaggtatgcccccacgacctaggcc agatcatggacttcccactgacttccaggccctgaatctgcagataccaaactcaaagggaccaaatccagttgccaatg agttcatcccaaagtcagccaccctaacacatagtgctagttctccaaatttctctacgctgaacggcaatggctttctc ccgcccatgacgagtgctgctccgcctccctcaggtcacatgatgccaccagagcagatgagctccgcccctggattagg tggaccgcctaccagtatgatgctctcacaggcccagacaatgtctaataccccaccaccacatcttgctcccaccaata tccctacagaggtagacaattatcacaatctgttccccctggagccacccttagctaatccaatgcagaaatcagctcga tttggctatcccaccacatgttataaagctgttaacactaaagatggtcttacttactgtctgcgcaggatacatggttt ccgattgtccaacacaaagtgcatgtctgtgatagacatgtggaagaagatgtaccatcctaacgtagtccagctcagag aggtgttcactaccaaagcatttggagataactccattgtttttgtgtatgactatttcccgactgcggagacattaatg acgagacatttctccggacctggtgcaatgaatggttataatcaatcgtttggtatggagggcggttcttcaagatcatt caatccgagtggtaaaggaggtatgaatgggccgaggcagcatgctgggcttctcccagagagtatgatctgggcctatg ttgtacagctgagttcagccctcagggccatacatgcagcaggtctggcatgcaggactatggaccccactaaaatactg atctacagcaaatctaggctgcgtttgaattgtgttggcatactggatgtgttaacatttgacaacaatcagggaagccc tctggccgtcatacagcattatcagcaagaagatctggtatatttgggtaaagtggtattagctttggcctgtaacactg tgatggccatacaaagagacaacttccaaaactctatggaactcattgctaggagctactcggctgacctcaaaaacttc tttctgtatttgctgactaatcagaataggccaagaagcataaacgatataatgccaatgataggagccaggttctatac acagcttgactcggcacaactcaggagtgatgttatcgaaaacgaacttgccaaggaagttgaaaacggaaggctgttcc gtcttttatctaagttgggcaccatcaatgaaaggccagaatacaacctagacccccagtggtcagagacgggcgatcgt tatatgttgaagttattccgtgactacttgttccaccaagtggatgagaatggggctccttggatagatacagcccacat catacagtgtctcaataaactggatgctggatctccagaaaagatctgcctgatgtctcgagatgaacacagtgttctcg tcgtctcgtatctcgaacttaagcagaattttgagagagcatttagcgaactgttgacctcgtctcaccatgccaacttc acgtaa |
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Protein
| Protein ID | pfu_aug2.0_31.1_03456.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_31.1_03456.t1 MSDSMGDNGDQFFNATFGTETIPEFPFNRPPLGRPQRAMGGPVMGSGMPGQGQGFPDTQRMDMHGQLDPRMDNLPPGAPG MRMDGYGQRMGSPTHRMDGGMPPRPRPDHGLPTDFQALNLQIPNSKGPNPVANEFIPKSATLTHSASSPNFSTLNGNGFL PPMTSAAPPPSGHMMPPEQMSSAPGLGGPPTSMMLSQAQTMSNTPPPHLAPTNIPTEVDNYHNLFPLEPPLANPMQKSAR FGYPTTCYKAVNTKDGLTYCLRRIHGFRLSNTKCMSVIDMWKKMYHPNVVQLREVFTTKAFGDNSIVFVYDYFPTAETLM TRHFSGPGAMNGYNQSFGMEGGSSRSFNPSGKGGMNGPRQHAGLLPESMIWAYVVQLSSALRAIHAAGLACRTMDPTKIL IYSKSRLRLNCVGILDVLTFDNNQGSPLAVIQHYQQEDLVYLGKVVLALACNTVMAIQRDNFQNSMELIARSYSADLKNF FLYLLTNQNRPRSINDIMPMIGARFYTQLDSAQLRSDVIENELAKEVENGRLFRLLSKLGTINERPEYNLDPQWSETGDR YMLKLFRDYLFHQVDENGAPWIDTAHIIQCLNKLDAGSPEKICLMSRDEHSVLVVSYLELKQNFERAFSELLTSSHHANF T |
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