Gene
| Gene Model ID | pfu_aug2.0_31.1_03457 |
|---|---|
| Locus | scaffold31.1 : 231397 ... 248963 : + |
| To GenomeBrowser | scaffold31.1:231397..248963 |
| Genes list of scaffold | scaffold31.1 |
| Synonym | pfu_aug1.0_35826.1_04943 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| amp-binding protein | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_31.1_03457.t1 | 2 | 1 | AMP-binding | 36 | 110 | 0.0 | 380.3 | 3.9e-22 | 1.5e-18 | 66.4 |
| pfu_aug2.0_31.1_03457.t1 | 2 | 2 | AMP-binding | 110 | 512 | 0.0 | 380.3 | 0.0 | 0.0 | 313.4 |
| pfu_aug2.0_31.1_03457.t1 | 1 | 1 | AMP-binding_C | 521 | 596 | 4.8e-17 | 62.6 | 2.8e-20 | 1.1e-16 | 61.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_31.1_03457.t1 | gi|676455637|ref|XP_009054070.1| | hypothetical protein LOTGIDRAFT_239446 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_31.1_03457.t1 | gi|585656075|ref|XP_006815592.1| | PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_31.1_03457.t1 | gi|260806739|ref|XP_002598241.1| | hypothetical protein BRAFLDRAFT_164673 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_31.1_03457.t1 | gi|319782251|ref|YP_004141727.1| | 0.0 | |
| pfu_aug2.0_31.1_03457.t1 | gi|499216893|ref|WP_010914433.1| | AMP-binding protein [Mesorhizobium loti] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_31.1_03457.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_31.1_03457.t1 atggattccagactacagagtacagtcagcagtcagaggttaaaatggagttattcccagggacctgcggagatgcctat gttgggcaccaccatcgggcaatgtctacaagaacaagtggagagaactcctgacaaagaggcagtagtgtatcatcttc agaaagaaagaaggacattttcacaactcctgaatgaagtagacaagttggcagcagggttactagagcttggtatacag aaaggagacagggtgggaatatggggacctaactccatagagtggtccttaacacagtatgctactgcaaggattggagc cattctggtagacaagttggcagcagggttactagagcttggtatacagaaaggagacagggtgggaatatggggaccta actccatagagtggtccttaacacagtatgctactgcaaggattggagccattctggtgaatataaatccacagtacaga ccacaagaactggaatttgctctgaaaaaggttggatgcaaggccctgatatcagctgagagatttagggattttgatta ttatcatatgatatttggactgatacctgaattagccactcagaaaccaggggccaccaagagtcatatacttccagact tgaagacaatcatcatgatgggaaagacacatcatccaggtacgttcagaatggatgacgtcatggaagccggtaccagt aaacagagggcggaaatcatggatttacaagatcaactacagtttgatgatccaatcaacatacagtttacatctggtac tactggattcccaaagggagccactctcactcatcataacataattaataacagctactttgtgggtcgtagactggaat accactgtagggacacaaggatatgtataccagtgccgctataccactgctttggaatggtcgtcggaagtttaatgtct ataacgcacggatcaacatgtgtgttccccagtccaggatttgacgctgggttggccttggaggcagtgacaaaggaaag atgcacgtcgctttatggtgtacctaccatgtttatagacatgttgaaccatccaaagtttgattcgtttgatttttcct cgctgtacacaggagtaatggctgggtcaccctgcccagtggaaaccatgagacaagtaaaccataaaatgaacatgccc caagtgacggtatgttacggcactacggagacaagtccagtaactcatcagagctttatggatgaccctatagagaaaag agtgtcaaccatcggccgaactcacaaccatgtagaggccaagatcatagatgagaatggtaaagttgtgcctgttaaca ccgccggtgaactgtgtacacgtggttatactacaatgttatgttactgggatgacccagataaaactaagggatgtata tcaacagagaggtggtatcattcaggggacatagcagtaatggatgaagagggattctgtcagattgtggggaggatcaa ggacatgattataaggggtggagaaaatgtatatcctacagaaatagagcaggtgctgtataaacacgctgatgtcaagg acgtacagatcgtgggtgtaccagatgaacgtttaggtgaggagatctacgcttttgttcaactcaaagatggtcatgca gtaacagaggcagatataaagcaattctgtaaagaaaagcttgcaagatacaaggtgccacgtcatgtagaatttgtgaa tgaatttccattaacagtgactggtaaagttcagaaatataaacttagagaagatgctacaaagaaacttggcataagtt ga |
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Protein
| Protein ID | pfu_aug2.0_31.1_03457.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_31.1_03457.t1 MDSRLQSTVSSQRLKWSYSQGPAEMPMLGTTIGQCLQEQVERTPDKEAVVYHLQKERRTFSQLLNEVDKLAAGLLELGIQ KGDRVGIWGPNSIEWSLTQYATARIGAILVDKLAAGLLELGIQKGDRVGIWGPNSIEWSLTQYATARIGAILVNINPQYR PQELEFALKKVGCKALISAERFRDFDYYHMIFGLIPELATQKPGATKSHILPDLKTIIMMGKTHHPGTFRMDDVMEAGTS KQRAEIMDLQDQLQFDDPINIQFTSGTTGFPKGATLTHHNIINNSYFVGRRLEYHCRDTRICIPVPLYHCFGMVVGSLMS ITHGSTCVFPSPGFDAGLALEAVTKERCTSLYGVPTMFIDMLNHPKFDSFDFSSLYTGVMAGSPCPVETMRQVNHKMNMP QVTVCYGTTETSPVTHQSFMDDPIEKRVSTIGRTHNHVEAKIIDENGKVVPVNTAGELCTRGYTTMLCYWDDPDKTKGCI STERWYHSGDIAVMDEEGFCQIVGRIKDMIIRGGENVYPTEIEQVLYKHADVKDVQIVGVPDERLGEEIYAFVQLKDGHA VTEADIKQFCKEKLARYKVPRHVEFVNEFPLTVTGKVQKYKLREDATKKLGIS |
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