Gene
| Gene Model ID | pfu_aug2.0_31.1_03458 |
|---|---|
| Locus | scaffold31.1 : 252967 ... 279238 : + |
| To GenomeBrowser | scaffold31.1:252967..279238 |
| Genes list of scaffold | scaffold31.1 |
| Synonym | pfu_aug1.0_4507.1_37906 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_31.1_03458.t1 | 2 | 1 | AMP-binding | 26 | 285 | 0.0 | 306.7 | 7.14662e-44 | 1.3e-40 | 139.0 |
| pfu_aug2.0_31.1_03458.t1 | 2 | 2 | AMP-binding | 328 | 519 | 0.0 | 306.7 | 0.0 | 0.0 | 164.7 |
| pfu_aug2.0_31.1_03458.t1 | 1 | 1 | AMP-binding_C | 528 | 580 | 9.6e-09 | 36.0 | 1.1e-11 | 2.0e-08 | 35.0 |
| pfu_aug2.0_31.1_03458.t1 | 1 | 1 | zf-C2H2_jaz | 673 | 698 | 3.9e-06 | 26.8 | 4.4e-09 | 8.2e-06 | 25.8 |
| pfu_aug2.0_31.1_03458.t1 | 1 | 1 | zf-met | 673 | 697 | 7.2e-06 | 26.0 | 1.2e-08 | 2.3e-05 | 24.4 |
Transcript
| Transcript ID | pfu_aug2.0_31.1_03458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_31.1_03458.t1 atgtcttcctcgggttccaaaggggccatcactgttggcatctttgaggcaaaatcagagcttaatatgtatatgcacaa ggtagacaagtttgcggcagggttgctggaacttggtatacagagaggagacagggtgggaatatggggaccaaactcgt tagaatggatcttaacacagtacgctacagctaggatcggcgctattctggttaacatcaatcccctttacagacaatac gagctggagtacgctctgaggaaggtaggttgtaaggcattggtggcagcagagggattcaaagatttggactactacaa tttgatctttcatctcgtcccggagcttgcaacccataaacctggagccataaaaagtcatctggnggagggattcaaag atttggactactacaatttgatctttcatctcgtcccggagcttgcaacccataaacctggagccataaaaagtcatcta cttccggatttgaagactatcatcatgatgggagaaaagagtcacccagggacttttcgtttctgtgatattcttgaagc aggaacaagcaagcaaagagcggaaataatggatttacaagataaacttcagttcgatgatcctatcaacatacaattta catctggtaccaccggtagtccaaaaggtgccacactgacacatcacaacatcttaaataacagttattttatgggattc aggttgaaccttcataccttagatgccaggctgtgtgtacccttgccactgtatcactgttctggaatggtagtaggtag tctgacaatgctaactcacggctccacgtgtgtgttacccagtccatggtatgatgccacccttaccctagaggnnnnnn nnntactgtctctaaagaaaggtttgattgtttattttaattctgtgcaagatacagacaaacaatgctcacccatgata cagacagacagacagacagagctcacccatggttccacgtgtgtgttacccagtccatggtatgatgtcacccttaccct agaggctgtctctaaagaaagatgtacgacacttggtggagtaccaaccatgtttatcgacatgttgaatcatcctaacc tcgagtcttttgacctgtcgtccctgcgttcgggtttgatgggtggggcaccatgccccatggaaacaatgagacaggtc atggagaagatgaacataactcacgccatgattctttacggttctactgagacaagtccttgtactcaccagaccatgtt tgatcatcctattgagaaaagagtatcctctgtgggagttacacacgaacacgtggagacaaagatagtagatgaggatg gtaatgtggtccctgtgaatacggccggtgagatgtgtacacgtggttacaccaccatgttgtattactgggatgaccca gacagaactcgtgacacaatcaccgcagataggtggtatcactcaggggatatggcaacgatggatgaagatggattctg tcaaattgtggggcggatcaaggacatgattataaggggtggagaaaatatatatcctacagaaatagagcaggtgcttt atacacatccagatataaaggacatacagattgttggtgtaccagatgagcgtttgggtgaggaggtctacgcttttgtt caacttaaagatggccatgctgccacgggggaagatattaaacaattctgcagagaaaagagaaaaaggacgataactct tcctactgttacgatggcaggtgtttacgagaaaaacccaggtgatcacagaaagaaatgggacaaagatgaatatgaga gaattgctcaagagaggcttgaggaggagcagagaaaactactggagaaggaattgaaagagcctccgacaaaacgtagc ttattacaacctagggactataaggttgatcttgattcaaaattaggaagatctcaggtgattacaaagaccacaccatc ttcacaacaaggagggtactactgcaatgtctgtgactgtgttgttaaagattccatcaatttccttgatcacattaatg gaaagaaacatcaaagaaatcttggtatgtccatgaagatagagagatcaacattagatcaagtcaaaaagaggtttgaa atgaataagaagaaaatggatgaaaagaagaaagattatgactttgaagagagattgaaagaattaaaagaggagggacc ctttgatgacgaatttacgtactga |
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Protein
| Protein ID | pfu_aug2.0_31.1_03458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_31.1_03458.t1 MSSSGSKGAITVGIFEAKSELNMYMHKVDKFAAGLLELGIQRGDRVGIWGPNSLEWILTQYATARIGAILVNINPLYRQY ELEYALRKVGCKALVAAEGFKDLDYYNLIFHLVPELATHKPGAIKSHLXEGFKDLDYYNLIFHLVPELATHKPGAIKSHL LPDLKTIIMMGEKSHPGTFRFCDILEAGTSKQRAEIMDLQDKLQFDDPINIQFTSGTTGSPKGATLTHHNILNNSYFMGF RLNLHTLDARLCVPLPLYHCSGMVVGSLTMLTHGSTCVLPSPWYDATLTLEXXXXLSLKKGLIVYFNSVQDTDKQCSPMI QTDRQTELTHGSTCVLPSPWYDVTLTLEAVSKERCTTLGGVPTMFIDMLNHPNLESFDLSSLRSGLMGGAPCPMETMRQV MEKMNITHAMILYGSTETSPCTHQTMFDHPIEKRVSSVGVTHEHVETKIVDEDGNVVPVNTAGEMCTRGYTTMLYYWDDP DRTRDTITADRWYHSGDMATMDEDGFCQIVGRIKDMIIRGGENIYPTEIEQVLYTHPDIKDIQIVGVPDERLGEEVYAFV QLKDGHAATGEDIKQFCREKRKRTITLPTVTMAGVYEKNPGDHRKKWDKDEYERIAQERLEEEQRKLLEKELKEPPTKRS LLQPRDYKVDLDSKLGRSQVITKTTPSSQQGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKIERSTLDQVKKRFE MNKKKMDEKKKDYDFEERLKELKEEGPFDDEFTY |
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