Gene
| Gene Model ID | pfu_aug2.0_310.1_00586 |
|---|---|
| Locus | scaffold310.1 : 183400 ... 210580 : + |
| To GenomeBrowser | scaffold310.1:183400..210580 |
| Genes list of scaffold | scaffold310.1 |
| Synonym | pfu_aug1.0_7467.1_60261 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras association domain-containing protein 2 | GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_310.1_00586.t1 | 1 | 1 | LIM | 21 | 63 | 5.3e-11 | 42.4 | 2.6e-14 | 9.7e-11 | 41.5 |
| pfu_aug2.0_310.1_00586.t1 | 1 | 1 | RA | 339 | 424 | 1.7e-12 | 47.6 | 1.1e-15 | 4.2e-12 | 46.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_310.1_00586.t1 | gi|676474276|ref|XP_009060094.1| | hypothetical protein LOTGIDRAFT_154126 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_310.1_00586.t1 | gi|524887927|ref|XP_005100545.1| | PREDICTED: ras association domain-containing protein 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_310.1_00586.t1 | gi|338719133|ref|XP_001495058.3| | PREDICTED: ras association domain-containing protein 2 isoform X1 [Equus caballus] | 7.0e-36 |
| pfu_aug2.0_310.1_00586.t1 | gi|332257880|ref|XP_003278033.1| | PREDICTED: ras association domain-containing protein 2 [Nomascus leucogenys] | 8.0e-36 |
| pfu_aug2.0_310.1_00586.t1 | gi|297706565|ref|XP_002830102.1| | PREDICTED: ras association domain-containing protein 2 [Pongo abelii] | 1.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_310.1_00586.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_310.1_00586.t1 atgagntttaagatcgaacgagccacaggagacgtacttgtcctcgctgagaggaaaacgtcattaggaaagaactggca tccaacatgtctgaaatgtcaggagtgtggtaaagtcctcaccccagggcaacatgcagagcacaagggcatgccttact gtcacaaaccatgttacgctgccaagtttggaccccaaatgatgggatacggttcaaatgtggcgtcacctgccaacttc aggcggggacagcacggtaccctatataatggtgatgtagactttgatatgaagaaagtatacgagagtccctcaccctc ctcgaaaaccaatcgcaaaagtacaagtgatataaactctaacaaagacaaagtatctggacatagacctaaaagtgaaa atcttcagcggacgaacaataatataccaaacgtcattcaaccatcacaacctgataaagaagcaaagacgccccaatgg accaagtacgacatgacagaacttggagtttatgaccagggaacgctgattgactacgaccaggacactctcattgacaa agctcagcagcagttggtacaaaaaatcaaagattttaatcaattttacgaagggaagaaaaggcaaccagtcgttgcca aggaagaaggtgatagtctagtcatacagggacccttaaggatatactggggagtagaacaagcaatcaagtttcagcaa ttcgataatgtaccagcctacccctcaccgggccccacaaactggaggcatagctttatgccaggggacaatggccctga tatcagcaaggaagatataaagaaactacagtatgaagagtccccgcccacctccccaagggttagtcgagggatagatg acagcatgatattcacgccccctgagggtgtggtgatgaggaagaagaatatcaggaaatttaatacagtagcctacaga ggggactcacgaccaaataaatggaaaagggcatcaattaacggtcatgtatataactttgatacacgtgtgttcacccc gatgttgggtagctgtactagtgttaccgttgacagtaaaaagactacagatgatgtcatcaggacacttctagaaaagt tcaagattgagaataagccaaatgaattctctctgtatatggtgtcagaaaatgaaggagagacattgctcaggacgcag gacattccattgttggagagaatagcattagggcccgatgaaagctcaggatgtaaactgtttctaaaggacagaatagc gcttcctcgcaaaggttcgctcgttaattttacggtagttgaagagtcggaagagcctcacacacctgatgaaattacgc cagtggttccgtggtccgaccccaaagaagaacggctacctgcagaaatagaacagcttgtggctctacccgagcctgta ctacagggaatactgcggaaattcaaggaggatgaagagattgacgtaaaaacaattaaagctaggtatgatttagtcag aagaaaaattagaggacagttagaaaaattaaagtcaggagccagtgtatga |
|
Protein
| Protein ID | pfu_aug2.0_310.1_00586.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_310.1_00586.t1 MXFKIERATGDVLVLAERKTSLGKNWHPTCLKCQECGKVLTPGQHAEHKGMPYCHKPCYAAKFGPQMMGYGSNVASPANF RRGQHGTLYNGDVDFDMKKVYESPSPSSKTNRKSTSDINSNKDKVSGHRPKSENLQRTNNNIPNVIQPSQPDKEAKTPQW TKYDMTELGVYDQGTLIDYDQDTLIDKAQQQLVQKIKDFNQFYEGKKRQPVVAKEEGDSLVIQGPLRIYWGVEQAIKFQQ FDNVPAYPSPGPTNWRHSFMPGDNGPDISKEDIKKLQYEESPPTSPRVSRGIDDSMIFTPPEGVVMRKKNIRKFNTVAYR GDSRPNKWKRASINGHVYNFDTRVFTPMLGSCTSVTVDSKKTTDDVIRTLLEKFKIENKPNEFSLYMVSENEGETLLRTQ DIPLLERIALGPDESSGCKLFLKDRIALPRKGSLVNFTVVEESEEPHTPDEITPVVPWSDPKEERLPAEIEQLVALPEPV LQGILRKFKEDEEIDVKTIKARYDLVRRKIRGQLEKLKSGASV |
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