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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_310.1_00586
Locus scaffold310.1 : 183400 ... 210580 : +
To GenomeBrowser scaffold310.1:183400..210580
Genes list of scaffold scaffold310.1
Synonym pfu_aug1.0_7467.1_60261

Manual annotation
Annotation by Blast2GO
Annotation GO
ras association domain-containing protein 2 GO:0007165

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_310.1_00586.t1 1 1 LIM 21 63 5.3e-11 42.4 2.6e-14 9.7e-11 41.5
pfu_aug2.0_310.1_00586.t1 1 1 RA 339 424 1.7e-12 47.6 1.1e-15 4.2e-12 46.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_310.1_00586.t1 gi|676474276|ref|XP_009060094.1| hypothetical protein LOTGIDRAFT_154126 [Lottia gigantea] 0.0
pfu_aug2.0_310.1_00586.t1 gi|524887927|ref|XP_005100545.1| PREDICTED: ras association domain-containing protein 2-like [Aplysia californica] 0.0
pfu_aug2.0_310.1_00586.t1 gi|338719133|ref|XP_001495058.3| PREDICTED: ras association domain-containing protein 2 isoform X1 [Equus caballus] 7.0e-36
pfu_aug2.0_310.1_00586.t1 gi|332257880|ref|XP_003278033.1| PREDICTED: ras association domain-containing protein 2 [Nomascus leucogenys] 8.0e-36
pfu_aug2.0_310.1_00586.t1 gi|297706565|ref|XP_002830102.1| PREDICTED: ras association domain-containing protein 2 [Pongo abelii] 1.0e-35

Transcript
Transcript IDpfu_aug2.0_310.1_00586.t1
Definition-
>pfu_aug2.0_310.1_00586.t1
atgagntttaagatcgaacgagccacaggagacgtacttgtcctcgctgagaggaaaacgtcattaggaaagaactggca
tccaacatgtctgaaatgtcaggagtgtggtaaagtcctcaccccagggcaacatgcagagcacaagggcatgccttact
gtcacaaaccatgttacgctgccaagtttggaccccaaatgatgggatacggttcaaatgtggcgtcacctgccaacttc
aggcggggacagcacggtaccctatataatggtgatgtagactttgatatgaagaaagtatacgagagtccctcaccctc
ctcgaaaaccaatcgcaaaagtacaagtgatataaactctaacaaagacaaagtatctggacatagacctaaaagtgaaa
atcttcagcggacgaacaataatataccaaacgtcattcaaccatcacaacctgataaagaagcaaagacgccccaatgg
accaagtacgacatgacagaacttggagtttatgaccagggaacgctgattgactacgaccaggacactctcattgacaa
agctcagcagcagttggtacaaaaaatcaaagattttaatcaattttacgaagggaagaaaaggcaaccagtcgttgcca
aggaagaaggtgatagtctagtcatacagggacccttaaggatatactggggagtagaacaagcaatcaagtttcagcaa
ttcgataatgtaccagcctacccctcaccgggccccacaaactggaggcatagctttatgccaggggacaatggccctga
tatcagcaaggaagatataaagaaactacagtatgaagagtccccgcccacctccccaagggttagtcgagggatagatg
acagcatgatattcacgccccctgagggtgtggtgatgaggaagaagaatatcaggaaatttaatacagtagcctacaga
ggggactcacgaccaaataaatggaaaagggcatcaattaacggtcatgtatataactttgatacacgtgtgttcacccc
gatgttgggtagctgtactagtgttaccgttgacagtaaaaagactacagatgatgtcatcaggacacttctagaaaagt
tcaagattgagaataagccaaatgaattctctctgtatatggtgtcagaaaatgaaggagagacattgctcaggacgcag
gacattccattgttggagagaatagcattagggcccgatgaaagctcaggatgtaaactgtttctaaaggacagaatagc
gcttcctcgcaaaggttcgctcgttaattttacggtagttgaagagtcggaagagcctcacacacctgatgaaattacgc
cagtggttccgtggtccgaccccaaagaagaacggctacctgcagaaatagaacagcttgtggctctacccgagcctgta
ctacagggaatactgcggaaattcaaggaggatgaagagattgacgtaaaaacaattaaagctaggtatgatttagtcag
aagaaaaattagaggacagttagaaaaattaaagtcaggagccagtgtatga

Protein
Protein IDpfu_aug2.0_310.1_00586.t1
Definition-
>pfu_aug2.0_310.1_00586.t1
MXFKIERATGDVLVLAERKTSLGKNWHPTCLKCQECGKVLTPGQHAEHKGMPYCHKPCYAAKFGPQMMGYGSNVASPANF
RRGQHGTLYNGDVDFDMKKVYESPSPSSKTNRKSTSDINSNKDKVSGHRPKSENLQRTNNNIPNVIQPSQPDKEAKTPQW
TKYDMTELGVYDQGTLIDYDQDTLIDKAQQQLVQKIKDFNQFYEGKKRQPVVAKEEGDSLVIQGPLRIYWGVEQAIKFQQ
FDNVPAYPSPGPTNWRHSFMPGDNGPDISKEDIKKLQYEESPPTSPRVSRGIDDSMIFTPPEGVVMRKKNIRKFNTVAYR
GDSRPNKWKRASINGHVYNFDTRVFTPMLGSCTSVTVDSKKTTDDVIRTLLEKFKIENKPNEFSLYMVSENEGETLLRTQ
DIPLLERIALGPDESSGCKLFLKDRIALPRKGSLVNFTVVEESEEPHTPDEITPVVPWSDPKEERLPAEIEQLVALPEPV
LQGILRKFKEDEEIDVKTIKARYDLVRRKIRGQLEKLKSGASV

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