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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_310.1_00588
Locus scaffold310.1 : 241210 ... 268008 : +
To GenomeBrowser scaffold310.1:241210..268008
Genes list of scaffold scaffold310.1
Synonym pfu_aug1.0_654.1_07617

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_310.1_00588.t1 3 1 ALS2CR8 110 171 4.4e-31 108.2 2.1e-10 6.1e-07 29.2
pfu_aug2.0_310.1_00588.t1 3 2 ALS2CR8 167 278 4.4e-31 108.2 2.1e-27 6.1e-24 84.8
pfu_aug2.0_310.1_00588.t1 2 1 MULE 311 377 8.2e-07 29.1 1.0e-09 3.0e-06 27.3
pfu_aug2.0_310.1_00588.t1 2 2 MULE 501 523 8.2e-07 29.1 5.0 15000.0 -4.0
pfu_aug2.0_310.1_00588.t1 1 1 SWIM 570 599 2.1e-07 30.3 1.9e-10 5.5e-07 28.9
pfu_aug2.0_310.1_00588.t1 3 3 ALS2CR8 725 766 4.4e-31 108.2 2.1 6200.0 -3.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_310.1_00588.t1 gi|449673290|ref|XP_004207916.1| 0.0
pfu_aug2.0_310.1_00588.t1 gi|260834499|ref|XP_002612248.1| hypothetical protein BRAFLDRAFT_100078 [Branchiostoma floridae] 0.0
pfu_aug2.0_310.1_00588.t1 gi|260833424|ref|XP_002611657.1| hedgehog interacting protein-like protein [Branchiostoma floridae] 0.0
pfu_aug2.0_310.1_00588.t1 gi|260815361|ref|XP_002602442.1| hypothetical protein BRAFLDRAFT_117021 [Branchiostoma floridae] 0.0
pfu_aug2.0_310.1_00588.t1 gi|548424599|ref|XP_005743012.1| PREDICTED: uncharacterized protein LOC102204999 [Pundamilia nyererei] 0.0

Transcript
Transcript IDpfu_aug2.0_310.1_00588.t1
Definition-
>pfu_aug2.0_310.1_00588.t1
atgtgcaggaatctgggattacacaacaccaatccagtggtagatgctagttcacatcagttcgcaggaggtttccattc
ggaacacaccaaagaaaagtcgggattggagataaaatatttgaaaatacctcaggcggcaaaaggaaaggagatatgca
ctgcgatcaagttccaagcaatgaatacaagtggtcatttggtttttagttcctttgttgatgcagaagaggaaatacgg
aactacgagataaaaaatatttgtagctactccatttttcgcaggaataaagggtttacacaagctctttcagaactaga
cttaacatcataccgtttgtcctgggaagacaaaaaggaaggttgtactatagaatatagtggggtgcccttcattaacc
ttggatatgatgtgagggagtgccagtttggacccgatcgaaacaaggccaacaaggcgaaacatgctaataaaaggatc
actggcaatgtttcagaatggaagaggaagaagctctccaagacttttcacaaaagtccctctcttatcaacacagtgga
ggagttccatgtgtttctgccaacagtggatagtcatgcaggacatatcctgggacagtttgcatcccttgcacagcctg
ttgatagccgagtaaaggctaagatagcacatttagtggatgaaggggtcagcaaggtatcagagatgaagaggcacata
cagattttcagcaaaaatgagcttcttccttcaaatgaaacctcttcaatttctagaagatttcatcctactgacaaaga
tgtcagaaattatatggctctctataagcaaaaatcaaggttctcatctaatgatcaagaaaatctgaagcaaaagatta
gacaatggagagacactttcccagatgacaatttctatctacgtactagtcatgtagtaggctccttcattacttcagac
gagaaaaaaacatctattatggagggtttgtccttcatcaaaggatggagtaatgagtggcacccctcctactttataac
tgattatgataattccgaaataggagccttggaagaaattttttcaggatgcacagtgttaatatgtgatttccacagag
agcaagcttggatgcgttggctgaagaaggtaaagagtcaagaagacagagattacactctatcacttatgcgaaaagtg
gctcattcgtcaacagaagcagattacaagtctaacctctctctcttaaaaaactgttctgtgtggaagaaagatgagaa
atttcgagggtggtttcatcatacctggatatcacaagaaaagagatgggtgaagcgtcatagaaaggattggttccata
ctcgtgtggcaacaacaaatggactggagaggcagcacagaaagttgaaagaagactttctctctcagacaagtgagaag
tctctttcaaatttggtgtcagtgattgtgaatcagttttgtcccagttcatatgacaggtatgttgagtacaatgtgaa
aagtaccgaaaactacagggtatatgatccatcaataccaatatttctgcgaaacaaaccgaagatgctggtcactcact
gtctgaacagattaccaccaaaggtggaacccattcctgagaacaacatttctcaactgccaaatggggaattccatgtg
aagagcattgattctggaatggtatacatcgtcaagctggaagaatcacttccaaactgttcttgtccagactggacgag
acacaaattgccatgcaaacatatgctagcaatatttaaacattttcctgcttgggattgggacttcttgccagatgtct
tccggtgttgtccccatttcaatttagatccagagctcaacacggtatgcaaactgagaccagattgttctgagcattca
gctaacttcctcatggatgatccagagaaaccaacatgctccatatcaccaccactgccacctcgtgataattgttcaag
aaagatcatcaaatgcaaagagcttttgaagcacattgagtcatcaatgtacaacatgactcatgatgacctttctattg
ctcaagaaagattagaaattctatcatcagatttccaagaggaccaacctaaggaggatggtttacctattctgaagaaa
ccgacaaaacagaaaaggaagtggaacaagtcaccactgaagcaaaagaagcaaaaagtctggcagggagtaataaatat
ggatagtatgagtcatcggttacatgtatctgaatgcaatgacacactgtcagtgaaacaagaagtaagcaaaatgtgga
tgcaaggtgagagcacccattacattgtctccaaatgtgcgggtataaatataacagatgaagacattatatcccttaga
ggagatggatggcttacagaccaggtaatggatgcatacatcggagcattagtgcaggcagaggttgacaaaggcaggaa
aattttgcagattgtgtcaggaacaatgacatccattcttgacggtcattgtgaaagcaatatgaccttaacatctacaa
aaattgctgattatgattgcattgtcggagcctacctacaagggagaagccactgggatctcatggttattgaaccacat
gcacgaaggcttacactgtataatcctcttggagagagtcaacgtcagcagagaataatgcaacagaattggtgtcgatt
ttatgagagaagaatgcagctgcatttggaaccattttcaacaggagactcatgggcagtaacaaatagaatgcatgcaa
aacaaaaagacagttttaattgtggtgtttatgttttaatggtgatctgtacacagtgtagcagaaaatttcatcagaag
agttactgcattggagaaacagagagagcggaatcgttcatatgtaggcaatgcataatagattcctcaattgaaatacc
agaagaagacaaaagctctttaaaagtcaaagacagtagttccacttcagtcagtctagataatcttgcagacagcctga
tagacctattacccaattcagtattaaaaagtggagtgtatccattatctgtcggagaaagcgcagacgattctttattc
agagcatgcagtattttgttgtggggtaatgcagagaagtcacacttcctgaaattggttattatctgctcagagatttt
agaatgtttcacaggaaagaattattgtgagttgatagagagagagatttgcaacagcctcagtgaaagtgacagaacaa
caatacgagaaatgcatttaaggactctggccgaaataacaaaaaggagaacaattcttacaggaagaggaataaaatta
acatcattccaaccaaaaaatacaagttcatccatttccctgaatcttcctcttgtggctgttcatatgggagttaatgg
tgaagagttcatccttcctcttgtagatggatgcctcatcggtagaggcgatagattcaagaagaagtgttatgcagagg
aacttggggtttgccagggaggaaaggagacatctacaatggtggagtgtacaagtgaacttttctataaaaatgaagaa
aagatctacactttgttatctgaaattgatctagagagtttcttaaaagaaatagaatctgagaaaataccatcaatgag
attcaatgcattcaaaggcagtaactttagggaaagacaaaagtggattgaccttaataactctgtcatggtttttacag
agaaaatggggatcagtcttgtgaagagagttggcaagatgttgaattgttgtccagaagatgtcatcaatatctatttg
cccgaggtttcagaatactag

Protein
Protein IDpfu_aug2.0_310.1_00588.t1
Definition-
>pfu_aug2.0_310.1_00588.t1
MCRNLGLHNTNPVVDASSHQFAGGFHSEHTKEKSGLEIKYLKIPQAAKGKEICTAIKFQAMNTSGHLVFSSFVDAEEEIR
NYEIKNICSYSIFRRNKGFTQALSELDLTSYRLSWEDKKEGCTIEYSGVPFINLGYDVRECQFGPDRNKANKAKHANKRI
TGNVSEWKRKKLSKTFHKSPSLINTVEEFHVFLPTVDSHAGHILGQFASLAQPVDSRVKAKIAHLVDEGVSKVSEMKRHI
QIFSKNELLPSNETSSISRRFHPTDKDVRNYMALYKQKSRFSSNDQENLKQKIRQWRDTFPDDNFYLRTSHVVGSFITSD
EKKTSIMEGLSFIKGWSNEWHPSYFITDYDNSEIGALEEIFSGCTVLICDFHREQAWMRWLKKVKSQEDRDYTLSLMRKV
AHSSTEADYKSNLSLLKNCSVWKKDEKFRGWFHHTWISQEKRWVKRHRKDWFHTRVATTNGLERQHRKLKEDFLSQTSEK
SLSNLVSVIVNQFCPSSYDRYVEYNVKSTENYRVYDPSIPIFLRNKPKMLVTHCLNRLPPKVEPIPENNISQLPNGEFHV
KSIDSGMVYIVKLEESLPNCSCPDWTRHKLPCKHMLAIFKHFPAWDWDFLPDVFRCCPHFNLDPELNTVCKLRPDCSEHS
ANFLMDDPEKPTCSISPPLPPRDNCSRKIIKCKELLKHIESSMYNMTHDDLSIAQERLEILSSDFQEDQPKEDGLPILKK
PTKQKRKWNKSPLKQKKQKVWQGVINMDSMSHRLHVSECNDTLSVKQEVSKMWMQGESTHYIVSKCAGINITDEDIISLR
GDGWLTDQVMDAYIGALVQAEVDKGRKILQIVSGTMTSILDGHCESNMTLTSTKIADYDCIVGAYLQGRSHWDLMVIEPH
ARRLTLYNPLGESQRQQRIMQQNWCRFYERRMQLHLEPFSTGDSWAVTNRMHAKQKDSFNCGVYVLMVICTQCSRKFHQK
SYCIGETERAESFICRQCIIDSSIEIPEEDKSSLKVKDSSSTSVSLDNLADSLIDLLPNSVLKSGVYPLSVGESADDSLF
RACSILLWGNAEKSHFLKLVIICSEILECFTGKNYCELIEREICNSLSESDRTTIREMHLRTLAEITKRRTILTGRGIKL
TSFQPKNTSSSISLNLPLVAVHMGVNGEEFILPLVDGCLIGRGDRFKKKCYAEELGVCQGGKETSTMVECTSELFYKNEE
KIYTLLSEIDLESFLKEIESEKIPSMRFNAFKGSNFRERQKWIDLNNSVMVFTEKMGISLVKRVGKMLNCCPEDVINIYL
PEVSEY

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