Gene
Gene Model ID | pfu_aug2.0_310.1_00588 |
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Locus | scaffold310.1 : 241210 ... 268008 : + |
To GenomeBrowser | scaffold310.1:241210..268008 |
Genes list of scaffold | scaffold310.1 |
Synonym | pfu_aug1.0_654.1_07617 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_310.1_00588.t1 | 3 | 1 | ALS2CR8 | 110 | 171 | 4.4e-31 | 108.2 | 2.1e-10 | 6.1e-07 | 29.2 |
pfu_aug2.0_310.1_00588.t1 | 3 | 2 | ALS2CR8 | 167 | 278 | 4.4e-31 | 108.2 | 2.1e-27 | 6.1e-24 | 84.8 |
pfu_aug2.0_310.1_00588.t1 | 2 | 1 | MULE | 311 | 377 | 8.2e-07 | 29.1 | 1.0e-09 | 3.0e-06 | 27.3 |
pfu_aug2.0_310.1_00588.t1 | 2 | 2 | MULE | 501 | 523 | 8.2e-07 | 29.1 | 5.0 | 15000.0 | -4.0 |
pfu_aug2.0_310.1_00588.t1 | 1 | 1 | SWIM | 570 | 599 | 2.1e-07 | 30.3 | 1.9e-10 | 5.5e-07 | 28.9 |
pfu_aug2.0_310.1_00588.t1 | 3 | 3 | ALS2CR8 | 725 | 766 | 4.4e-31 | 108.2 | 2.1 | 6200.0 | -3.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_310.1_00588.t1 | gi|449673290|ref|XP_004207916.1| | 0.0 | |
pfu_aug2.0_310.1_00588.t1 | gi|260834499|ref|XP_002612248.1| | hypothetical protein BRAFLDRAFT_100078 [Branchiostoma floridae] | 0.0 |
pfu_aug2.0_310.1_00588.t1 | gi|260833424|ref|XP_002611657.1| | hedgehog interacting protein-like protein [Branchiostoma floridae] | 0.0 |
pfu_aug2.0_310.1_00588.t1 | gi|260815361|ref|XP_002602442.1| | hypothetical protein BRAFLDRAFT_117021 [Branchiostoma floridae] | 0.0 |
pfu_aug2.0_310.1_00588.t1 | gi|548424599|ref|XP_005743012.1| | PREDICTED: uncharacterized protein LOC102204999 [Pundamilia nyererei] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_310.1_00588.t1 |
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Definition | - |
>pfu_aug2.0_310.1_00588.t1 atgtgcaggaatctgggattacacaacaccaatccagtggtagatgctagttcacatcagttcgcaggaggtttccattc ggaacacaccaaagaaaagtcgggattggagataaaatatttgaaaatacctcaggcggcaaaaggaaaggagatatgca ctgcgatcaagttccaagcaatgaatacaagtggtcatttggtttttagttcctttgttgatgcagaagaggaaatacgg aactacgagataaaaaatatttgtagctactccatttttcgcaggaataaagggtttacacaagctctttcagaactaga cttaacatcataccgtttgtcctgggaagacaaaaaggaaggttgtactatagaatatagtggggtgcccttcattaacc ttggatatgatgtgagggagtgccagtttggacccgatcgaaacaaggccaacaaggcgaaacatgctaataaaaggatc actggcaatgtttcagaatggaagaggaagaagctctccaagacttttcacaaaagtccctctcttatcaacacagtgga ggagttccatgtgtttctgccaacagtggatagtcatgcaggacatatcctgggacagtttgcatcccttgcacagcctg ttgatagccgagtaaaggctaagatagcacatttagtggatgaaggggtcagcaaggtatcagagatgaagaggcacata cagattttcagcaaaaatgagcttcttccttcaaatgaaacctcttcaatttctagaagatttcatcctactgacaaaga tgtcagaaattatatggctctctataagcaaaaatcaaggttctcatctaatgatcaagaaaatctgaagcaaaagatta gacaatggagagacactttcccagatgacaatttctatctacgtactagtcatgtagtaggctccttcattacttcagac gagaaaaaaacatctattatggagggtttgtccttcatcaaaggatggagtaatgagtggcacccctcctactttataac tgattatgataattccgaaataggagccttggaagaaattttttcaggatgcacagtgttaatatgtgatttccacagag agcaagcttggatgcgttggctgaagaaggtaaagagtcaagaagacagagattacactctatcacttatgcgaaaagtg gctcattcgtcaacagaagcagattacaagtctaacctctctctcttaaaaaactgttctgtgtggaagaaagatgagaa atttcgagggtggtttcatcatacctggatatcacaagaaaagagatgggtgaagcgtcatagaaaggattggttccata ctcgtgtggcaacaacaaatggactggagaggcagcacagaaagttgaaagaagactttctctctcagacaagtgagaag tctctttcaaatttggtgtcagtgattgtgaatcagttttgtcccagttcatatgacaggtatgttgagtacaatgtgaa aagtaccgaaaactacagggtatatgatccatcaataccaatatttctgcgaaacaaaccgaagatgctggtcactcact gtctgaacagattaccaccaaaggtggaacccattcctgagaacaacatttctcaactgccaaatggggaattccatgtg aagagcattgattctggaatggtatacatcgtcaagctggaagaatcacttccaaactgttcttgtccagactggacgag acacaaattgccatgcaaacatatgctagcaatatttaaacattttcctgcttgggattgggacttcttgccagatgtct tccggtgttgtccccatttcaatttagatccagagctcaacacggtatgcaaactgagaccagattgttctgagcattca gctaacttcctcatggatgatccagagaaaccaacatgctccatatcaccaccactgccacctcgtgataattgttcaag aaagatcatcaaatgcaaagagcttttgaagcacattgagtcatcaatgtacaacatgactcatgatgacctttctattg ctcaagaaagattagaaattctatcatcagatttccaagaggaccaacctaaggaggatggtttacctattctgaagaaa ccgacaaaacagaaaaggaagtggaacaagtcaccactgaagcaaaagaagcaaaaagtctggcagggagtaataaatat ggatagtatgagtcatcggttacatgtatctgaatgcaatgacacactgtcagtgaaacaagaagtaagcaaaatgtgga tgcaaggtgagagcacccattacattgtctccaaatgtgcgggtataaatataacagatgaagacattatatcccttaga ggagatggatggcttacagaccaggtaatggatgcatacatcggagcattagtgcaggcagaggttgacaaaggcaggaa aattttgcagattgtgtcaggaacaatgacatccattcttgacggtcattgtgaaagcaatatgaccttaacatctacaa aaattgctgattatgattgcattgtcggagcctacctacaagggagaagccactgggatctcatggttattgaaccacat gcacgaaggcttacactgtataatcctcttggagagagtcaacgtcagcagagaataatgcaacagaattggtgtcgatt ttatgagagaagaatgcagctgcatttggaaccattttcaacaggagactcatgggcagtaacaaatagaatgcatgcaa aacaaaaagacagttttaattgtggtgtttatgttttaatggtgatctgtacacagtgtagcagaaaatttcatcagaag agttactgcattggagaaacagagagagcggaatcgttcatatgtaggcaatgcataatagattcctcaattgaaatacc agaagaagacaaaagctctttaaaagtcaaagacagtagttccacttcagtcagtctagataatcttgcagacagcctga tagacctattacccaattcagtattaaaaagtggagtgtatccattatctgtcggagaaagcgcagacgattctttattc agagcatgcagtattttgttgtggggtaatgcagagaagtcacacttcctgaaattggttattatctgctcagagatttt agaatgtttcacaggaaagaattattgtgagttgatagagagagagatttgcaacagcctcagtgaaagtgacagaacaa caatacgagaaatgcatttaaggactctggccgaaataacaaaaaggagaacaattcttacaggaagaggaataaaatta acatcattccaaccaaaaaatacaagttcatccatttccctgaatcttcctcttgtggctgttcatatgggagttaatgg tgaagagttcatccttcctcttgtagatggatgcctcatcggtagaggcgatagattcaagaagaagtgttatgcagagg aacttggggtttgccagggaggaaaggagacatctacaatggtggagtgtacaagtgaacttttctataaaaatgaagaa aagatctacactttgttatctgaaattgatctagagagtttcttaaaagaaatagaatctgagaaaataccatcaatgag attcaatgcattcaaaggcagtaactttagggaaagacaaaagtggattgaccttaataactctgtcatggtttttacag agaaaatggggatcagtcttgtgaagagagttggcaagatgttgaattgttgtccagaagatgtcatcaatatctatttg cccgaggtttcagaatactag |
Protein
Protein ID | pfu_aug2.0_310.1_00588.t1 |
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Definition | - |
>pfu_aug2.0_310.1_00588.t1 MCRNLGLHNTNPVVDASSHQFAGGFHSEHTKEKSGLEIKYLKIPQAAKGKEICTAIKFQAMNTSGHLVFSSFVDAEEEIR NYEIKNICSYSIFRRNKGFTQALSELDLTSYRLSWEDKKEGCTIEYSGVPFINLGYDVRECQFGPDRNKANKAKHANKRI TGNVSEWKRKKLSKTFHKSPSLINTVEEFHVFLPTVDSHAGHILGQFASLAQPVDSRVKAKIAHLVDEGVSKVSEMKRHI QIFSKNELLPSNETSSISRRFHPTDKDVRNYMALYKQKSRFSSNDQENLKQKIRQWRDTFPDDNFYLRTSHVVGSFITSD EKKTSIMEGLSFIKGWSNEWHPSYFITDYDNSEIGALEEIFSGCTVLICDFHREQAWMRWLKKVKSQEDRDYTLSLMRKV AHSSTEADYKSNLSLLKNCSVWKKDEKFRGWFHHTWISQEKRWVKRHRKDWFHTRVATTNGLERQHRKLKEDFLSQTSEK SLSNLVSVIVNQFCPSSYDRYVEYNVKSTENYRVYDPSIPIFLRNKPKMLVTHCLNRLPPKVEPIPENNISQLPNGEFHV KSIDSGMVYIVKLEESLPNCSCPDWTRHKLPCKHMLAIFKHFPAWDWDFLPDVFRCCPHFNLDPELNTVCKLRPDCSEHS ANFLMDDPEKPTCSISPPLPPRDNCSRKIIKCKELLKHIESSMYNMTHDDLSIAQERLEILSSDFQEDQPKEDGLPILKK PTKQKRKWNKSPLKQKKQKVWQGVINMDSMSHRLHVSECNDTLSVKQEVSKMWMQGESTHYIVSKCAGINITDEDIISLR GDGWLTDQVMDAYIGALVQAEVDKGRKILQIVSGTMTSILDGHCESNMTLTSTKIADYDCIVGAYLQGRSHWDLMVIEPH ARRLTLYNPLGESQRQQRIMQQNWCRFYERRMQLHLEPFSTGDSWAVTNRMHAKQKDSFNCGVYVLMVICTQCSRKFHQK SYCIGETERAESFICRQCIIDSSIEIPEEDKSSLKVKDSSSTSVSLDNLADSLIDLLPNSVLKSGVYPLSVGESADDSLF RACSILLWGNAEKSHFLKLVIICSEILECFTGKNYCELIEREICNSLSESDRTTIREMHLRTLAEITKRRTILTGRGIKL TSFQPKNTSSSISLNLPLVAVHMGVNGEEFILPLVDGCLIGRGDRFKKKCYAEELGVCQGGKETSTMVECTSELFYKNEE KIYTLLSEIDLESFLKEIESEKIPSMRFNAFKGSNFRERQKWIDLNNSVMVFTEKMGISLVKRVGKMLNCCPEDVINIYL PEVSEY |