Gene
| Gene Model ID | pfu_aug2.0_3107.1_25638 |
|---|---|
| Locus | scaffold3107.1 : 59375 ... 71225 : - |
| To GenomeBrowser | scaffold3107.1:59375..71225 |
| Genes list of scaffold | scaffold3107.1 |
| Synonym | pfu_aug1.0_20718.1_62028 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3107.1_25638.t1 | 3 | 1 | BTB | 50 | 76 | 8.5e-38 | 128.7 | 4.5 | 6000.0 | -2.8 |
| pfu_aug2.0_3107.1_25638.t1 | 3 | 2 | BTB | 90 | 194 | 8.5e-38 | 128.7 | 2.3e-29 | 3.1e-26 | 91.5 |
| pfu_aug2.0_3107.1_25638.t1 | 2 | 1 | DUF3342 | 103 | 196 | 4.2e-11 | 42.5 | 3.3e-10 | 4.4e-07 | 29.3 |
| pfu_aug2.0_3107.1_25638.t1 | 3 | 1 | BACK | 174 | 195 | 4.7e-31 | 106.6 | 1.1 | 1500.0 | -1.0 |
| pfu_aug2.0_3107.1_25638.t1 | 3 | 3 | BTB | 211 | 276 | 8.5e-38 | 128.7 | 2.5e-15 | 3.4e-12 | 46.3 |
| pfu_aug2.0_3107.1_25638.t1 | 2 | 2 | DUF3342 | 217 | 332 | 4.2e-11 | 42.5 | 2.1e-06 | 0.0028 | 16.8 |
| pfu_aug2.0_3107.1_25638.t1 | 3 | 2 | BACK | 244 | 244 | 4.7e-31 | 106.6 | 0.51 | 690.0 | 0.1 |
| pfu_aug2.0_3107.1_25638.t1 | 3 | 3 | BACK | 282 | 383 | 4.7e-31 | 106.6 | 3.5e-34 | 4.7e-31 | 106.6 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 1 | Kelch_1 | 429 | 465 | 0.0 | 265.7 | 1.4e-10 | 1.9e-07 | 30.4 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 1 | Kelch_6 | 430 | 468 | 0.0 | 167.7 | 1.8e-08 | 2.4e-05 | 24.2 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 1 | Kelch_4 | 430 | 464 | 4.0e-30 | 103.3 | 9.1e-06 | 0.012 | 15.3 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 1 | Kelch_2 | 430 | 464 | 8.7e-26 | 88.6 | 0.00026 | 0.34 | 10.7 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 1 | Kelch_5 | 430 | 454 | 1.1e-09 | 38.0 | 0.32 | 430.0 | 0.9 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 1 | Kelch_3 | 431 | 474 | 4.9e-30 | 102.9 | 1.5e-05 | 0.021 | 15.0 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 2 | Kelch_1 | 467 | 512 | 0.0 | 265.7 | 2.0e-15 | 2.7e-12 | 46.0 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 2 | Kelch_4 | 467 | 510 | 4.0e-30 | 103.3 | 0.00018 | 0.24 | 11.2 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 2 | Kelch_2 | 467 | 506 | 8.7e-26 | 88.6 | 6.8e-05 | 0.091 | 12.5 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 2 | Kelch_5 | 467 | 488 | 1.1e-09 | 38.0 | 0.051 | 69.0 | 3.5 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 2 | Kelch_6 | 468 | 515 | 0.0 | 167.7 | 3.2e-09 | 4.3e-06 | 26.6 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 2 | Kelch_3 | 477 | 522 | 4.9e-30 | 102.9 | 4.2e-07 | 0.00057 | 19.9 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 3 | Kelch_1 | 514 | 559 | 0.0 | 265.7 | 1.7e-13 | 2.4e-10 | 39.8 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 3 | Kelch_6 | 514 | 562 | 0.0 | 167.7 | 1.3e-11 | 1.7e-08 | 34.2 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 3 | Kelch_4 | 514 | 558 | 4.0e-30 | 103.3 | 6.9e-08 | 9.3e-05 | 22.1 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 3 | Kelch_2 | 514 | 558 | 8.7e-26 | 88.6 | 2.3e-05 | 0.031 | 14.0 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 3 | Kelch_5 | 514 | 549 | 1.1e-09 | 38.0 | 0.0059 | 7.9 | 6.5 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 3 | Kelch_3 | 524 | 568 | 4.9e-30 | 102.9 | 2.2e-08 | 3.0e-05 | 24.0 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 4 | Kelch_1 | 561 | 605 | 0.0 | 265.7 | 2.0e-13 | 2.7e-10 | 39.6 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 4 | Kelch_4 | 561 | 599 | 4.0e-30 | 103.3 | 0.0062 | 8.4 | 6.2 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 4 | Kelch_2 | 561 | 599 | 8.7e-26 | 88.6 | 0.0034 | 4.6 | 7.1 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 4 | Kelch_5 | 561 | 584 | 1.1e-09 | 38.0 | 0.00054 | 0.73 | 9.8 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 4 | Kelch_6 | 566 | 606 | 0.0 | 167.7 | 3.4e-07 | 0.00046 | 20.2 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 4 | Kelch_3 | 572 | 616 | 4.9e-30 | 102.9 | 0.06 | 81.0 | 3.5 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 5 | Kelch_1 | 608 | 653 | 0.0 | 265.7 | 1.0e-20 | 1.3e-17 | 62.9 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 5 | Kelch_6 | 608 | 656 | 0.0 | 167.7 | 3.2e-12 | 4.4e-09 | 36.1 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 5 | Kelch_4 | 609 | 653 | 4.0e-30 | 103.3 | 2.2e-11 | 3.0e-08 | 33.3 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 5 | Kelch_2 | 609 | 652 | 8.7e-26 | 88.6 | 3.9e-08 | 5.3e-05 | 22.8 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 5 | Kelch_5 | 609 | 643 | 1.1e-09 | 38.0 | 3.2e-06 | 0.0043 | 16.9 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 5 | Kelch_3 | 618 | 662 | 4.9e-30 | 102.9 | 2.1e-08 | 2.8e-05 | 24.1 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 6 | Kelch_1 | 656 | 697 | 0.0 | 265.7 | 7.0e-17 | 9.5e-14 | 50.6 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 6 | Kelch_2 | 656 | 697 | 8.7e-26 | 88.6 | 3.1e-07 | 0.00041 | 19.9 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 6 | Kelch_6 | 658 | 700 | 0.0 | 167.7 | 6.1e-10 | 8.2e-07 | 28.9 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 6 | Kelch_4 | 659 | 697 | 4.0e-30 | 103.3 | 1.2e-05 | 0.017 | 14.9 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 6 | Kelch_5 | 661 | 687 | 1.1e-09 | 38.0 | 0.05 | 67.0 | 3.5 |
| pfu_aug2.0_3107.1_25638.t1 | 6 | 6 | Kelch_3 | 666 | 710 | 4.9e-30 | 102.9 | 9.6e-08 | 0.00013 | 22.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3107.1_25638.t1 | gi|524883162|ref|XP_005098214.1| | PREDICTED: kelch-like protein 8-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_3107.1_25638.t1 | gi|676446792|ref|XP_009051196.1| | hypothetical protein LOTGIDRAFT_143089 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_3107.1_25638.t1 | gi|260832542|ref|XP_002611216.1| | hypothetical protein BRAFLDRAFT_207414 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_3107.1_25638.t1 | gi|542153662|ref|XP_005485696.1| | PREDICTED: kelch-like protein 8 [Zonotrichia albicollis] | 0.0 |
| pfu_aug2.0_3107.1_25638.t1 | gi|557265432|ref|XP_006018155.1| | PREDICTED: kelch-like protein 8 isoform X1 [Alligator sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3107.1_25638.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3107.1_25638.t1 atgtctcaggaacctcctttaccaaccagatctgacagtctgcctgatcactcgtcatctccctccagctcctctgaagg tcctgacctaccaccagccatccctccattacccgggacgtcatcaggcatacagttacacagtccggcttcaagctcta gcagtctgaaaaaaatggccacgtcagaccagctgcatgttgatacagtcgctacacaagaatttgaatcaaagagccac tacaaaaatggattcaaaactttcctagagttttataacaatgatcagatgtatgatgttgaaataaaggttgggtcaaa gtcgttcaggtgtcacaggattgttctggcatgtgtcagtaattactttctcaccatgttcacttcagaaatgacggaaa gtaaacagaaagaagtcacaattcatgatatcgacgaaacggccatggaaaaactagtgcaatatgcatacacatccaaa cttcaactgacaatcgacaatgttcagccgcttctttatgcagcatccatacttcaaatggagatagtagccaaagcatg ttgtgaattcatgaagaagcacctacatccaaccaattgtattggagtccataatttcgcacaacaacataatcaaatga cggaaagtaaacagaaagaagtcacgattcatgatatcgacgaaacggccatggaaaaactagtgcaatatgcatacaca tccaaacttcaactgacaatcgacaatgttcagccgcttctttatgcagcatccatacttcaaatggagatagtagccaa agcatgttgtgaattcatgaagaagcacctacatccaaccaattgtattggagtccataatttcgcacaacaacataatc gtacagagcttatcaacatggcagacgaatacattctggaaaattttcttgatgttgttgagacggaagaattcaaacat atcccatatgaattgttagataaacttgtaagttcgcaagatttgaacgttaaaaatgaaatgcaggtgtatgaggctgt gataatgtggatgaagcaagatgtgccaaatcgtagagatcatctcgcaaaacttatcgcaaaggtcaaattgccgttac ttaatcctgattaccttctgcaaacagtagctacagaagaaatggtccggaaggattttgtgtgtagagattttgtagat gatgccaaggcgtaccaaatgtcacttgccagtcttgtatcagacatcaagatttctgacagaacaaggccaaggaaaag ctatgctggagttctgttttgtgttggtggcagaggtgcttcaggggatcctttcaaaagtatagaatgttatgatccac ggaagaacagatggttccaggtgtcggagatgaactgccgacggaggcatgtgggagtgtgttgtacaggaggatacctg tatgcagtaggtgggcatgatggaggtaaacatttgaagagtggagagctgtttgatccaacaagtaacaactggaaggc tataaggtctatgtccacacccagacgtggtatagccttagcctcactaggaggggctatctatgccgtaggaggtttgg acgattctacctgttacaatctgatggagagatacgacccatcctcagaccaatggacattagtagccaatatgaatgtc cccaggggtggtgtgggagtggccacattaaagaattacatttatgctattggtggtaatgacggagtggcctcccttga attatgtgagagatacgaccctctactgaataaatggcttcacattgctcctatgaagagacatagagcgggggcaggta cagctgtactggatggctatctatatgttgtaggtggctttgatgatagttccccacttgattcctgtgaaagatatgac ccatacactaacaaatggacagaggttgccagcatgtcctgttgccgtggaggtgttggcatagcaaccttaggaggtca gatatttgcagtgggaggtcatgatggaacaaactatctgaattcagtggaggcttatgatcccatgacaaacagctgga atcctgtagcagagatcaaccagtgtcgagccggggcaggactagcgtactgtgactgttcgccgacattgtttcagaaa catcttgagcaagctacttcacaactacagtgttattga |
|
Protein
| Protein ID | pfu_aug2.0_3107.1_25638.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3107.1_25638.t1 MSQEPPLPTRSDSLPDHSSSPSSSSEGPDLPPAIPPLPGTSSGIQLHSPASSSSSLKKMATSDQLHVDTVATQEFESKSH YKNGFKTFLEFYNNDQMYDVEIKVGSKSFRCHRIVLACVSNYFLTMFTSEMTESKQKEVTIHDIDETAMEKLVQYAYTSK LQLTIDNVQPLLYAASILQMEIVAKACCEFMKKHLHPTNCIGVHNFAQQHNQMTESKQKEVTIHDIDETAMEKLVQYAYT SKLQLTIDNVQPLLYAASILQMEIVAKACCEFMKKHLHPTNCIGVHNFAQQHNRTELINMADEYILENFLDVVETEEFKH IPYELLDKLVSSQDLNVKNEMQVYEAVIMWMKQDVPNRRDHLAKLIAKVKLPLLNPDYLLQTVATEEMVRKDFVCRDFVD DAKAYQMSLASLVSDIKISDRTRPRKSYAGVLFCVGGRGASGDPFKSIECYDPRKNRWFQVSEMNCRRRHVGVCCTGGYL YAVGGHDGGKHLKSGELFDPTSNNWKAIRSMSTPRRGIALASLGGAIYAVGGLDDSTCYNLMERYDPSSDQWTLVANMNV PRGGVGVATLKNYIYAIGGNDGVASLELCERYDPLLNKWLHIAPMKRHRAGAGTAVLDGYLYVVGGFDDSSPLDSCERYD PYTNKWTEVASMSCCRGGVGIATLGGQIFAVGGHDGTNYLNSVEAYDPMTNSWNPVAEINQCRAGAGLAYCDCSPTLFQK HLEQATSQLQCY |
|