Gene
| Gene Model ID | pfu_aug2.0_3130.1_02334 |
|---|---|
| Locus | scaffold3130.1 : 16836 ... 22699 : + |
| To GenomeBrowser | scaffold3130.1:16836..22699 |
| Genes list of scaffold | scaffold3130.1 |
| Synonym | pfu_aug1.0_34222.1_55497 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glycoside hydrolase family 18 protein | GO:0008152 GO:0016798 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3130.1_02334.t1 | 1 | 1 | Glyco_hydro_18 | 38 | 139 | 6.9e-12 | 45.4 | 5.6e-16 | 8.2e-12 | 45.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3130.1_02334.t1 | gi|330840352|ref|XP_003292181.1| | hypothetical protein DICPUDRAFT_156870 [Dictyostelium purpureum] | 3.0e-26 |
| pfu_aug2.0_3130.1_02334.t1 | gi|330797567|ref|XP_003286831.1| | hypothetical protein DICPUDRAFT_47033 [Dictyostelium purpureum] | 2.0e-25 |
| pfu_aug2.0_3130.1_02334.t1 | gi|66821553|ref|XP_644238.1| | glycoside hydrolase family 18 protein [Dictyostelium discoideum AX4] | 2.0e-25 |
| pfu_aug2.0_3130.1_02334.t1 | gi|196005521|ref|XP_002112627.1| | hypothetical protein TRIADDRAFT_56839 [Trichoplax adhaerens] | 1.0e-22 |
| pfu_aug2.0_3130.1_02334.t1 | gi|390336078|ref|XP_799229.2| | 1.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_3130.1_02334.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3130.1_02334.t1 atggacagtaattgcaaccgttcggggaaacacttgcccctgtacagaccaacggttatgtgctccgatcaatggaactg tacgaaacgagatacttttcctgtaaaacagctggaaaatgcaacggcacgtacaatatgggttaaacaaaaccttcaac gtgtccaagacaacttcctagatggactgaacatagactttgaggaaccaatccgcaaacggtacatctttgagaaatgg gcgtacacagccctagtggaggaggcctacaagacttttaaagcagtaaatccgaattatcaggtaacgatagatgtacc atactcaccgaactgtatatacgaccgttgctatgactacaggagtctgtcgtcagtgactgactttttagtcctcatgg cctacgacgaatgggacagacaggaagctgataactttgccggaccaataggagactacgttaagaccacgaaagaacat gacgtggcagctatggtacgatga |
|
Protein
| Protein ID | pfu_aug2.0_3130.1_02334.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3130.1_02334.t1 MDSNCNRSGKHLPLYRPTVMCSDQWNCTKRDTFPVKQLENATARTIWVKQNLQRVQDNFLDGLNIDFEEPIRKRYIFEKW AYTALVEEAYKTFKAVNPNYQVTIDVPYSPNCIYDRCYDYRSLSSVTDFLVLMAYDEWDRQEADNFAGPIGDYVKTTKEH DVAAMVR |
|