Gene
| Gene Model ID | pfu_aug2.0_314.1_13978 |
|---|---|
| Locus | scaffold314.1 : 149649 ... 151508 : - |
| To GenomeBrowser | scaffold314.1:149649..151508 |
| Genes list of scaffold | scaffold314.1 |
| Synonym | pfu_aug1.0_4245.1_44908 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-7-like | GO:0006811 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_314.1_13978.t1 | 1 | 1 | Neur_chan_LBD | 2 | 182 | 9.0e-35 | 119.7 | 1.6e-38 | 1.2e-34 | 119.3 |
| pfu_aug2.0_314.1_13978.t1 | 2 | 1 | Neur_chan_memb | 190 | 275 | 4.0e-13 | 49.8 | 3.0e-15 | 2.2e-11 | 44.1 |
| pfu_aug2.0_314.1_13978.t1 | 2 | 2 | Neur_chan_memb | 309 | 341 | 4.0e-13 | 49.8 | 0.00033 | 2.4 | 7.9 |
Transcript
| Transcript ID | pfu_aug2.0_314.1_13978.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_314.1_13978.t1 atgaacgtaacgtttcagtctcatctattacgaatgatttatttggatgaaactggaagtgaactaaagacgtacatgag ttttgatgtgtattggactgacgagttgctccaatggaacacgacagactacgctggtattgaaaatatccaggtgtcgg tggatgatatttggcttccagacctcgtattagccaacggactgggagaacacaatgatctaccgagtcaacagtcagtt ctgaacattcatcataccggcggggtaagctgggcacccggtggtccattaaagacctactgcgacgtggacatcagtaa gtatccgtttgatacacaaacctgtgatttattcgttaagccctctatgctggactcaacaatgcaggtcctacgcccgt cagcgaagaaaccagaccctctggaccatttcactccagactcacagtgggacgttgttgatgctagtcaacattttcag actataaggaaacaacgtggtcttgaggagatacacttcaagcttatgctaattctaaggagaagaactctttattacat actgaacatgatttcaccagttgttttactagcgtttttgagtgtttgttgtttcatcatcccaccatcctgtggagaga aaatgacactctgcatctcaatattcctgacgtttgcagtgtacataacgataatcacagaagaaatgccacggtctact attggcatctctcgatttgggctattcctaacaagtcaacttatcctcagcgctctggcgattgttttgaattccgtcgt tctgcacgtataccacaaggaggaggaagtatgtggttgtgcttttctgaaagcgaagaaaagaggcaaccttgcctata tgagtaatgctgacagatcctcagaaaccatcatttccaatgacagttccaaatcaactgatgacaaatgctcaccgaat aaactgttggcaaacaaactggacagattcttcatgattatgtttctcctgttgaatattatatctttcgttgtttttgc atcatttttctaa |
|
Protein
| Protein ID | pfu_aug2.0_314.1_13978.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_314.1_13978.t1 MNVTFQSHLLRMIYLDETGSELKTYMSFDVYWTDELLQWNTTDYAGIENIQVSVDDIWLPDLVLANGLGEHNDLPSQQSV LNIHHTGGVSWAPGGPLKTYCDVDISKYPFDTQTCDLFVKPSMLDSTMQVLRPSAKKPDPLDHFTPDSQWDVVDASQHFQ TIRKQRGLEEIHFKLMLILRRRTLYYILNMISPVVLLAFLSVCCFIIPPSCGEKMTLCISIFLTFAVYITIITEEMPRST IGISRFGLFLTSQLILSALAIVLNSVVLHVYHKEEEVCGCAFLKAKKRGNLAYMSNADRSSETIISNDSSKSTDDKCSPN KLLANKLDRFFMIMFLLLNIISFVVFASFF |
|