Gene
| Gene Model ID | pfu_aug2.0_314.1_13981 |
|---|---|
| Locus | scaffold314.1 : 219909 ... 228099 : + |
| To GenomeBrowser | scaffold314.1:219909..228099 |
| Genes list of scaffold | scaffold314.1 |
| Synonym | pfu_aug1.0_131504.1_71776 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| t-box transcription factor tbx1 | GO:0000122 GO:0001162 GO:0001228 GO:0001569 GO:0001708 GO:0001755 GO:0001934 GO:0001945 GO:0001974 GO:0002053 GO:0003148 GO:0005634 GO:0007368 GO:0007498 GO:0007605 GO:0009952 GO:0021644 GO:0030855 GO:0030878 GO:0035176 GO:0035909 GO:0042473 GO:0042474 GO:0042693 GO:0042803 GO:0043410 GO:0043587 GO:0044344 GO:0045596 GO:0045944 GO:0048384 GO:0048538 GO:0048703 GO:0048752 GO:0050679 GO:0060017 GO:0060023 GO:0060037 GO:0060325 GO:0060415 GO:0060982 GO:0070166 GO:0071600 GO:0072513 GO:0090103 GO:2001037 GO:2001054 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_314.1_13981.t1 | 1 | 1 | T-box | 1 | 92 | 1.4e-36 | 125.6 | 1.10001e-40 | 1.7e-36 | 125.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_314.1_13981.t1 | gi|625198411|ref|XP_007641249.1| | PREDICTED: T-box transcription factor TBX1 isoform X1 [Cricetulus griseus] | 0.0 |
| pfu_aug2.0_314.1_13981.t1 | gi|675615764|ref|XP_008936718.1| | PREDICTED: T-box transcription factor TBX1-like, partial [Merops nubicus] | 0.0 |
| pfu_aug2.0_314.1_13981.t1 | gi|593760959|ref|XP_007119174.1| | PREDICTED: T-box transcription factor TBX1 [Physeter catodon] | 0.0 |
| pfu_aug2.0_314.1_13981.t1 | gi|470594953|ref|XP_004310529.1| | PREDICTED: T-box transcription factor TBX1 [Tursiops truncatus] | 0.0 |
| pfu_aug2.0_314.1_13981.t1 | gi|667329860|ref|XP_008591044.1| | PREDICTED: T-box transcription factor TBX1, partial [Galeopterus variegatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_314.1_13981.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_314.1_13981.t1 atgtttcccacatttcaagtgcgcctgtacggactggatccaatggcggattacatggtgatgatggactttgtgccgtg tgatgacaagcgatataggtattccttccatagctctagctgggtggtggccgggaaggcggatccacacatgccggggc ggatccatgtccaccccgactcccccgccaagggatcacaatggatgaagcaggtggtttcctttgacaaactcaaactg accaataatttgatggatgacaacggccatgtaagtacacaaattaattga |
|
Protein
| Protein ID | pfu_aug2.0_314.1_13981.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_314.1_13981.t1 MFPTFQVRLYGLDPMADYMVMMDFVPCDDKRYRYSFHSSSWVVAGKADPHMPGRIHVHPDSPAKGSQWMKQVVSFDKLKL TNNLMDDNGHVSTQIN |
|