Gene
| Gene Model ID | pfu_aug2.0_3140.1_02345 |
|---|---|
| Locus | scaffold3140.1 : 51776 ... 63828 : + |
| To GenomeBrowser | scaffold3140.1:51776..63828 |
| Genes list of scaffold | scaffold3140.1 |
| Synonym | pfu_aug1.0_2360.1_66285 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3140.1_02345.t1 | 1 | 1 | RVT_1 | 211 | 340 | 3.0e-17 | 62.6 | 7.2e-21 | 5.4e-17 | 61.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3140.1_02345.t1 | gi|759055515|ref|XP_011336988.1| | PREDICTED: uncharacterized protein LOC105279117 [Cerapachys biroi] | 4.00001e-40 |
Transcript
| Transcript ID | pfu_aug2.0_3140.1_02345.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3140.1_02345.t1 atgtccgttcgtgactcgaatctaccggacatctatggacacctaacggatatcaacggacacctaacggacacttaccg gagatgcaacggacgagtaacggataccaagggacagaccagacgatcaaccgctgaagactcgcattcttcgggagagg acacagatcattatgaggaggatatatctgactccagtggcagtgatgaacagtcggatcatggtaatgatcacgaatct gaatcagacgaaagacatatgaggttcgaccctttgacctctaactcgaggactccagttcccaaccacccgctgctaag cggccctttcgtcagggaccctccgagcgaggcatctacttgggagggtcgtaaaacaaagctgggaaaaggagcgattg gtcaaaaggtcgagctgactcgacaaagaaaaggtacgttgataccgaaagtaaaaacaagtcaattactacagaaaaaa gcggtggagaatgcaagtccggagcgaaatcagtttctaagtactttatttgttcgtccaaagaaggattggggaatgag acccattttcaacttgaaagccctgaaaaaaaatcaattctttacgaacatggaagggtttttcatggtaaaacatctgc tacaggaaaaagatttcatgatcaaagtagatctcaaagatgcatacttttgcattccgatacacgagactcacaggaaa ttcctgagattcgagtgggaaggcaacatcatgcagaacagaagcctagctttcggcttggcatgcgggccaagaatatt cacgaaaataatgaaacccatggtatcatttctcaggaggatagggatccgcctgataatttatctagacgatattctag tgatgaatcagacggagtccgatctgataagggaccgtgataccttattacagcttctccattctcggggatggctgata aactggaagaaatcagttctacaaccagctcagacaatggaatttctaggtttaacgatagactcgaatctaatgaaagt atcccttcctcagacgaaactacacagtcttatcaagaaatgtgaagacgatgtaaaatcagaccacattactatccaaa acttggcaagtttaattggctcattgaatgctactgcagaggcagtaacaccggccgcactgtatgagctacagatgcac aaaacaaagagccttctaaaaacctaa |
|
Protein
| Protein ID | pfu_aug2.0_3140.1_02345.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3140.1_02345.t1 MSVRDSNLPDIYGHLTDINGHLTDTYRRCNGRVTDTKGQTRRSTAEDSHSSGEDTDHYEEDISDSSGSDEQSDHGNDHES ESDERHMRFDPLTSNSRTPVPNHPLLSGPFVRDPPSEASTWEGRKTKLGKGAIGQKVELTRQRKGTLIPKVKTSQLLQKK AVENASPERNQFLSTLFVRPKKDWGMRPIFNLKALKKNQFFTNMEGFFMVKHLLQEKDFMIKVDLKDAYFCIPIHETHRK FLRFEWEGNIMQNRSLAFGLACGPRIFTKIMKPMVSFLRRIGIRLIIYLDDILVMNQTESDLIRDRDTLLQLLHSRGWLI NWKKSVLQPAQTMEFLGLTIDSNLMKVSLPQTKLHSLIKKCEDDVKSDHITIQNLASLIGSLNATAEAVTPAALYELQMH KTKSLLKT |
|