Gene
| Gene Model ID | pfu_aug2.0_3144.1_15724 |
|---|---|
| Locus | scaffold3144.1 : 35360 ... 51135 : - |
| To GenomeBrowser | scaffold3144.1:35360..51135 |
| Genes list of scaffold | scaffold3144.1 |
| Synonym | pfu_aug1.0_1097.1_22448 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| myeloid differentiation primary response protein 88 | GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3144.1_15724.t3 | 1 | 1 | Death | 77 | 133 | 3.6e-08 | 33.0 | 1.5e-11 | 7.3e-08 | 32.0 |
| pfu_aug2.0_3144.1_15724.t3 | 2 | 1 | TIR_2 | 133 | 156 | 2.0e-09 | 37.5 | 0.58 | 2800.0 | -1.6 |
| pfu_aug2.0_3144.1_15724.t3 | 1 | 1 | TIR | 173 | 299 | 3.8e-12 | 45.8 | 3.7e-15 | 1.9e-11 | 43.6 |
| pfu_aug2.0_3144.1_15724.t3 | 2 | 2 | TIR_2 | 174 | 281 | 2.0e-09 | 37.5 | 1.7e-12 | 8.6e-09 | 35.4 |
Transcript
| Transcript ID | pfu_aug2.0_3144.1_15724.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3144.1_15724.t1 atgtcaagcatccgacattcaccagaatcatcatccattagtcgatccaagagcacaattcaattaccataccgtttgaa aaatgtctctctagatgcattaagtcacagttcccgggaaggaatagcgaggaatctgaacgttgaatttcgtagttcaa atgacacatctcaaagaataagtaacttcattggtgctgcagaattagtgggttttggatggcaagaaatcgaaaaattt aaacatcaggatagcccaacagaggaactgttgaaggaatggtgttctcgtgacgatttggaggaaccaaccattggaaa tctatgggatatcttggtacagcttaatcggactgatgtgttagagaacggcaaggatatcataattcaagatgcccaga atttcctgaaagcgaggagaagacagcgattacgtcattcacctttacagagcagagatgtcggtagtacatcagatgga gccatggatcaggacgttgacgaatcaaagattctctccagagctgatgttatccatggaatgccacagacgtttgattg ttttgtctgttttaactacaacaagatcgaccacgacttcgtaaaagagatgtcatgcaaattggagaacaaaccatata gtttagttatgttcataccgggcagagatgatcttccgggaggatccagatacactatggatgcacaacttataaaacat agatgccgtcgattagtcgtcattgtatccagaaacttccataacagtgcagcatgtgacttccacgtcaagttttgtca tgccctctcgccaggtgcgaggagcaaaaaaatagttccagttttgatagagccagatgtattagttcctgacatattaa accatgtcggattgtgtgattatacaaaagaagatatgagagactggttttgggatagattgtcagatgccctcaaagca cctttacatccacaggaatgttaa |
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| Transcript ID | pfu_aug2.0_3144.1_15724.t2 |
| Definition | - |
>pfu_aug2.0_3144.1_15724.t2 atgatgacatacttgttaattaacacgaccactcagctagacggatttagttcactatattttctaaagacttcagttaa gaggaggaggctatatatagatgaacagctctctaaagccaaagatgcattaagtcacagttcccgggaaggaatagcga ggaatctgaacgttgaatttcgtagttcaaatgacacatctcaaagaataagtaacttcattggtgctgcagaattagtg ggttttggatggcaagaaatcgaaaaatttaaacatcaggatagcccaacagaggaactgttgaaggaatggtgttctcg tgacgatttggaggaaccaaccattggaaatctatgggatatcttggtacagcttaatcggactgatgtgttagagaacg gcaaggatatcataattcaagatgcccagaatttcctgaaagcgaggagaagacagcgattacgtcattcacctttacag agcagagatgtcggtagtacatcagatggagccatggatcaggacgttgacgaatcaaagattctctccagagctgatgt tatccatggaatgccacagacgtttgattgttttgtctgttttaactacaacaagatcgaccacgacttcgtaaaagaga tgtcatgcaaattggagaacaaaccatatagtttagttatgttcataccgggcagagatgatcttccgggaggatccaga tacactatggatgcacaacttataaaacatagatgccgtcgattagtcgtcattgtatccagaaacttccataacagtgc agcatgtgacttccacgtcaagttttgtcatgccctctcgccaggtgcgaggagcaaaaaaatagttccagttttgatag agccagatgtattagttcctgacatattaaaccatgtcggattgtgtgattatacaaaagaagatatgagagactggttt tgggatagattgtcagatgccctcaaagcacctttacatccacaggaatgttaa |
|
| Transcript ID | pfu_aug2.0_3144.1_15724.t3 |
| Definition | - |
>pfu_aug2.0_3144.1_15724.t3 atgatgacatacttgttaattaacacgaccactcagctagacggatttagttcactatattttctaaagacttcagttaa gaggaggaggctatatatagatgaacagctctctaaagccaaagatgcattaagtcacagttcccgggaaggaatagcga ggaatctgaacgttgaatttcgtagttcaaatgacacatctcaaagaataagtaacttcattggtgctgcagaattagtg ggttttggatggcaagaaatcgaaaaatttaaacatcaggatagcccaacagaggaactgttgaaggaatggtgttctcg tgacgatttggaggaaccaaccattggaaatctatgggatatcttggtacagcttaatcggactgatgtgttagagaacg gcaaggatatcataatcggtagtacatcagatggagccatggatcaggacgttgacgaatcaaagattctctccagagct gatgttatccatggaatgccacagacgtttgattgttttgtctgttttaactacaacaagatcgaccacgacttcgtaaa agagatgtcatgcaaattggagaacaaaccatatagtttagttatgttcataccgggcagagatgatcttccgggaggat ccagatacactatggatgcacaacttataaaacatagatgccgtcgattagtcgtcattgtatccagaaacttccataac agtgcagcatgtgacttccacgtcaagttttgtcatgccctctcgccaggtgcgaggagcaaaaaaatagttccagtttt gatagagccagatgtattagttcctgacatattaaaccatgtcggattgtgtgattatacaaaagaagatatgagagact ggttttgggatagattgtcagatgccctcaaagcacctttacatccacaggaatgttaa |
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Protein
| Protein ID | pfu_aug2.0_3144.1_15724.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3144.1_15724.t1 MSSIRHSPESSSISRSKSTIQLPYRLKNVSLDALSHSSREGIARNLNVEFRSSNDTSQRISNFIGAAELVGFGWQEIEKF KHQDSPTEELLKEWCSRDDLEEPTIGNLWDILVQLNRTDVLENGKDIIIQDAQNFLKARRRQRLRHSPLQSRDVGSTSDG AMDQDVDESKILSRADVIHGMPQTFDCFVCFNYNKIDHDFVKEMSCKLENKPYSLVMFIPGRDDLPGGSRYTMDAQLIKH RCRRLVVIVSRNFHNSAACDFHVKFCHALSPGARSKKIVPVLIEPDVLVPDILNHVGLCDYTKEDMRDWFWDRLSDALKA PLHPQEC |
|
| Protein ID | pfu_aug2.0_3144.1_15724.t2 |
| Definition | - |
>pfu_aug2.0_3144.1_15724.t2 MMTYLLINTTTQLDGFSSLYFLKTSVKRRRLYIDEQLSKAKDALSHSSREGIARNLNVEFRSSNDTSQRISNFIGAAELV GFGWQEIEKFKHQDSPTEELLKEWCSRDDLEEPTIGNLWDILVQLNRTDVLENGKDIIIQDAQNFLKARRRQRLRHSPLQ SRDVGSTSDGAMDQDVDESKILSRADVIHGMPQTFDCFVCFNYNKIDHDFVKEMSCKLENKPYSLVMFIPGRDDLPGGSR YTMDAQLIKHRCRRLVVIVSRNFHNSAACDFHVKFCHALSPGARSKKIVPVLIEPDVLVPDILNHVGLCDYTKEDMRDWF WDRLSDALKAPLHPQEC |
|
| Protein ID | pfu_aug2.0_3144.1_15724.t3 |
| Definition | - |
>pfu_aug2.0_3144.1_15724.t3 MMTYLLINTTTQLDGFSSLYFLKTSVKRRRLYIDEQLSKAKDALSHSSREGIARNLNVEFRSSNDTSQRISNFIGAAELV GFGWQEIEKFKHQDSPTEELLKEWCSRDDLEEPTIGNLWDILVQLNRTDVLENGKDIIIGSTSDGAMDQDVDESKILSRA DVIHGMPQTFDCFVCFNYNKIDHDFVKEMSCKLENKPYSLVMFIPGRDDLPGGSRYTMDAQLIKHRCRRLVVIVSRNFHN SAACDFHVKFCHALSPGARSKKIVPVLIEPDVLVPDILNHVGLCDYTKEDMRDWFWDRLSDALKAPLHPQEC |
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