Gene
| Gene Model ID | pfu_aug2.0_3144.1_15725 |
|---|---|
| Locus | scaffold3144.1 : 61326 ... 67319 : + |
| To GenomeBrowser | scaffold3144.1:61326..67319 |
| Genes list of scaffold | scaffold3144.1 |
| Synonym | pfu_aug1.0_155569.1_49961 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| myeloid differentiation primary response protein 88-like | GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3144.1_15725.t1 | 1 | 1 | TIR | 26 | 121 | 3.3e-10 | 39.5 | 1.2e-13 | 8.6e-10 | 38.2 |
| pfu_aug2.0_3144.1_15725.t1 | 1 | 1 | TIR_2 | 27 | 136 | 1.2e-10 | 41.4 | 3.0e-14 | 2.3e-10 | 40.5 |
Transcript
| Transcript ID | pfu_aug2.0_3144.1_15725.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3144.1_15725.t1 atggatcatcatatagatgaaacactggtcctctgtagagctgatgtaacacttggagagccccagcactttgatgcctt tgtctgctataacccagaaggggaagatctgaagtttgtaaaacagatgatcagtgtacttgaaaacgaaccacataatc tgaaactgtttgtgccgtggagagatgatctgccgggaggttctcgctacgttatagatgctaaactcatagaaagcaga tgtcgtagaatggtgattataatgtccaggaattaccagagcagtgcagcttgtgactttcaggttaaatttgcccatgc tctctcaccaggtgccaggagtaagaagttgattccggttctgatcgagcctggcgttatgattcctcaagtgttacgtc atgtgacgctgtgtgatttcaccaagcgtgacttgatggactggttctgggacagactgtctaaagctatcagggcacct ctagaccccagaaacatgacaacttttcataaatcatcttcaagtacatcatcttcattatcctcatcatcatcgtcatc agctatagacatccccatggaaatgggcctgggatttaacgccagtagtcactctgacgtcagagaaagtctgtccagct atcagagctcacagagcagtacgatagatccggactcgggattctccagcctgtctccctctaactcgagtcagcagagc atctcgtcctcctacagtagtttccaggaagccggaatcgaagcccccatggaaactgacccacctccggaagaaaaccg cactagccggaaaaagaaaacgggattttttgacagacttcgagggaagaaaaataacacaagttctcactgctga |
|
Protein
| Protein ID | pfu_aug2.0_3144.1_15725.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3144.1_15725.t1 MDHHIDETLVLCRADVTLGEPQHFDAFVCYNPEGEDLKFVKQMISVLENEPHNLKLFVPWRDDLPGGSRYVIDAKLIESR CRRMVIIMSRNYQSSAACDFQVKFAHALSPGARSKKLIPVLIEPGVMIPQVLRHVTLCDFTKRDLMDWFWDRLSKAIRAP LDPRNMTTFHKSSSSTSSSLSSSSSSSAIDIPMEMGLGFNASSHSDVRESLSSYQSSQSSTIDPDSGFSSLSPSNSSQQS ISSSYSSFQEAGIEAPMETDPPPEENRTSRKKKTGFFDRLRGKKNNTSSHC |
|