Gene
| Gene Model ID | pfu_aug2.0_315.1_17279 |
|---|---|
| Locus | scaffold315.1 : 269647 ... 274809 : - |
| To GenomeBrowser | scaffold315.1:269647..274809 |
| Genes list of scaffold | scaffold315.1 |
| Synonym | pfu_aug1.0_11851.1_32127 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gamma-aminobutyric acid type b receptor subunit 2- partial | GO:0016020 GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_315.1_17279.t1 | 1 | 1 | 7tm_3 | 128 | 262 | 2.6e-22 | 79.3 | 2.3e-26 | 3.4e-22 | 78.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_315.1_17279.t1 | gi|704300777|ref|XP_010162801.1| | PREDICTED: gamma-aminobutyric acid type B receptor subunit 2, partial [Caprimulgus carolinensis] | 4.0e-37 |
| pfu_aug2.0_315.1_17279.t1 | gi|701408187|ref|XP_009970602.1| | PREDICTED: gamma-aminobutyric acid type B receptor subunit 2-like, partial [Tyto alba] | 2.0e-36 |
| pfu_aug2.0_315.1_17279.t1 | gi|669283894|ref|XP_008634585.1| | PREDICTED: gamma-aminobutyric acid type B receptor subunit 2-like, partial [Corvus brachyrhynchos] | 3.0e-36 |
| pfu_aug2.0_315.1_17279.t1 | gi|686605019|ref|XP_009278948.1| | PREDICTED: gamma-aminobutyric acid type B receptor subunit 2 [Aptenodytes forsteri] | 3.0e-36 |
| pfu_aug2.0_315.1_17279.t1 | gi|733882021|ref|XP_010706961.1| | PREDICTED: gamma-aminobutyric acid type B receptor subunit 2-like [Meleagris gallopavo] | 9.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_315.1_17279.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_315.1_17279.t1 atgttaaacttactgatcgagaacatttttgtggtgtttggaggaaaagtcttccagcaaattgtcggaattccaatggg gaacaattgtgccccactccttgccgacactttccttaactcgtacgaagctgaattcattcaatctttggtctctgaag ggaaaagatacttagcttctgacttcaacttcacttacatatacattgactatgtgttgtccatcaataatccaaaattc gcggattacctcagnagccgtcctaagtcggcaccggttgcccattggcctcgtccaccctctgacggtccagtcttgac agaggagcttcgaggtgtgagcaaacctttgttttttatagtcaatgctctagccagtgctgggattgtgttcaacctct ttttgttgacatttaatgtcatctaccgaaacagaagaatattgaaaatgtcgagtccgaatattaattatttaatttgc tgcggaacactccttatttacatcagcactctgctatttggatttgaaacagaaggagatcttagcaaattgaaaagtga aaaggtcgtctccagcatctgtatggcaacgtgttggatgttaactttaggcttcagcagtagttttggtgccattattg ccaaggcttggagaataaggcgactgatgtccaccaccaaaatgaaaaagcagaatatcaaagactggcacctgtttata gccatcggtatcctcgcattgattgatttgctgatactaattccatggtcagccatagaccctgtcaaaattgaagtatt tcctatggacagagaggcaagtaatttagaaataacctaa |
|
Protein
| Protein ID | pfu_aug2.0_315.1_17279.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_315.1_17279.t1 MLNLLIENIFVVFGGKVFQQIVGIPMGNNCAPLLADTFLNSYEAEFIQSLVSEGKRYLASDFNFTYIYIDYVLSINNPKF ADYLXSRPKSAPVAHWPRPPSDGPVLTEELRGVSKPLFFIVNALASAGIVFNLFLLTFNVIYRNRRILKMSSPNINYLIC CGTLLIYISTLLFGFETEGDLSKLKSEKVVSSICMATCWMLTLGFSSSFGAIIAKAWRIRRLMSTTKMKKQNIKDWHLFI AIGILALIDLLILIPWSAIDPVKIEVFPMDREASNLEIT |
|